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scnpilot_p_inoc_scaffold_2554_4

Organism: SCNpilot_P_inoc_Thiobacillus_63_16_multi

partial RP 38 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 2
Location: 3125..6343

Top 3 Functional Annotations

Value Algorithm Source
RND transporter, hydrophobe/amphiphile efflux-1 family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WTA8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 999.99
  • Bit_score: 1541
  • Evalue 0.0
  • rbh
DNA, contig: SP614 {ECO:0000313|EMBL:GAN12852.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 999.99
  • Bit_score: 1541
  • Evalue 0.0
hydrophobe/amphiphile efflux-1 (HAE1) family transporter similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 999.99
  • Bit_score: 1362
  • Evalue 0.0
  • rbh

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3219
ATGCATCGCTTCTTCGTCTACAACCCCGTCTTCGCCTGGGTGATCGCGGCATTCGTCTCGCTGTTCGGCGTGATCTGCCTCGTCATGCTGCCGATCGAGCAATATCCCGATGTCGCGCCGCCCTCGCTGACGCTCAGCATCACCTATACCGGAGCGGATGCCGAAACGCTCGACCGCAACGTGACCTCGATCATCGAGAAGGAGATGAACGGGGTCGAGAATTTCCTCTACATGGCTTCGACCAGCCGGTCGAACGGCACCGCCGAGGTGAAGGTCACGTTTCGACCCGGCACCAATCTCGATATTGCCCAGACCCAGGTGCAGGACCGGCTGAGCCGGGTCGAGCCGCGCCTGCCGCAGGAAGTGCGGCAGGTGGGAATCGGCGTCACCAAATCCTCGTCGGGCTTCCTGATGCTGATCGCCCTGACATCGAAGAGCGGAAATACCCCGGCGGTCGAACTCGGCAACTACGCCTCGACCCGGATCATGGACGAGATCCGCCGCGTCCCGGGCGTCGGCGATGTGCTGCTGTTCGGCACGCCCTATGCGATGCGCATCTGGCTCGATCCGGAAAAGCTGGCGGGTTACGGCCTGTCGGCATCCGAGGCGCTGGCCGCCGTGCAGGAGCAGAACAGCCAGACCGCCGGCGGCGGCCTCGGCGAACAGCCGATCACGCGCAGCGCCGAATTCACCGCCAAGATCCTCACCCAGAACCGCTTTTCCTCGCCCGACCAGTTCCGCGAGATCATCGTGCGCGCCAACCCGGATGGCTCGTCGATTCGTCTCGGCGATGTCGCGAAGGTCGAACTGGGTTCCGAGAATTACGGCTTCCGGCTGACGCTCGACGGCAAGGAAAGCGCCGGCATGGCGATCCAGCTCGCCAGCGGCGCCAATGCGCTCGCCGCGGCGGAAGCGGTGCGTGCCGTGATGGCGGTTCTGGAAACCAGCTTCCCCCCCGACATGGGCTGGACCGTGCCCTACGACACGACGCCGTTCATCAACGCTTCGGTCGAGAACGTCGTGGTCACGCTGGTCGAGGCGATGGTGCTCGTCTTCCTCGTCATGTTCGTCTTCCTGCAGAACTGGCGCAGCACGTTCATCGCGGCCGTCGTGGTGCCGATCGCGCTCGCGGGCGCCTGTCTTGGCCTGTGGCTGTTCGGCTTTTCGATCAACACCCTGTCGCTGTTCGGCATGGTGGTGGCGATCGGCATCCTGGTCGACGACGCCATCGTCGTGGTCGAGAATGTCGAGCGCATCATGGCGGAAGAAGGACTTCCCCCGCGCCTCGCGACCGTGAAGGCGATGAGGCAGATCACCGGGGCGCTGGTCGGGATCACGCTGGTGCTGGTCGCGGTGTTCGTGCCGATGGCCTTCTTCCCCGGATCGACCGGCGGCATCTACCGCCAGTTCTCGGTGACGCTGGCGGTTTCGATCTTTTTCTCCTTCGTGCTGGCGGTCACGCTGACCCCGGCGTTGTGCGCGACGCTGCTCAAACCCCATGCGCATGGGGGCGAAGGCGGCGTATCCGAACCCGCGCCCGGCCTGCGTGGTCTTCCGCGGCGGCTTGGCAACGGATTCAACCAACGCTTCGGCCGCGCGACGGAAAAATATGCCCGCACGGTCGGCACCATGCTCTCCGCGCCGGTTCGCTGGCTGGCCGTGTTTATCGTCATGGTCGGGGTGACGCTGCTGCTGTTCGGCCGGCTGCCCGGCGGCTTCCTGCCCACCGAGGATCAGGGCGTCGTACTGGTCAATTTTGACGCAGCGCCCGGCGCGACCCTGCAGCGAACGGCCGAGGCCACGGAACAGGCCGAAGCCTGGCTGCAACAACAGCCCGAGGTGCGCAGCGTCGTCACCGTCGTCGGCTTCAACTTCTTCTCGCAGGGGCAGTCCAGTGCGCTGTCCTTCGTCGATCTGAAGCCATGGAACGAACGCACGGGTGCGGGTGCAAGCGCCGAAGCGCTGATCACGCGCGCCAACGCTGCTTTTTCCACCATCCCGGTCGCGACGATATTCGGCCTCAGCCCGCCGCCGATTCCGGCGCTCGGCAATGCGGTCGGCTTCAGCATGAAGATCGAGGATCGCGGCGGCCTTGGCACCGCGGCGCTCGAACAGGCCCGCGGCCAGATACTCGTCGAGGCAGCGCAGCATCCGTTGCTGGCGGGCGTCCGCCCCGAAGGTCCGCCCCCGGCGCCGCAGCTCTATGTCGATATCGACCGTATTGAGGCGCGGGCGCTCGGCCTGCAGATCGCCGATGTCAATCAAACGCTGTCGATCGCTTTCGGCTCGGCCTATGCCAACGACTTCGTGCGCGAAGGCAATGTGCTGCGCGTCTATATTCAGGCGGGCGCCGAGCAGCGGATGACGCCGGAACATATTCTGGCGCTGCGCGTGCGCAACGATCAGGGCGAGATGGTGCCGTTTTCCTCATTCACCTCGGTCAAGTGGCGCTCGGGGCCGCAACAGCTGGAACGCTACAACGGCTACCCCGCGCTGACGATCTCCGGTCAGGCGGCGCCGGGCGAGTCGAGCGGCGCCGCACTCGAAGCGATGGAAAAAATCGCGAACAGCGTGCTGAGCGGCGGGCAGCGCTTCGAATGGACCGGCACCGCCTACGAGGAGAAGCAGGCGGGCAGCCAGATCGGTCTGCTGCTCGGCCTGTCGCTCGTCGTCATCTTCCTGCTGCTGGCGGCGCTGTATGGAAGCTGGGCGATCCCGCTGTCGGTGTTGCTCATCGTTCCATTCGGCGTGCTCGGCGCAGTCGTGTTTTCGATGCTGCGCGGATTTCCGGCCGATGTGTATTTCAATGTCGGCCTGATCACCGTCATCGGGCTGGCGGCGAAGAACGCCATTCTCATCGTGGAATTCGCCATGGACGAGGAACGGCTGGGCAGGGACGCGCTGACCGCCACGACCGAGGCGGCGCGTCTGCGCCTGCGGCCGATCCTGATGACCAGCTTCGCCTTCATCCTCGGCATGGTGCCGCTGGTGATCGCGTCGGGCGCGGGGGCGGCAAGCCGGCAGGCGGTGGGCACCGGCGTTGCCGGCGGCATGCTCGTCGCCACCCTGCTCGGGCTATTCTTCACGCCGGTCTTCTACGTCGCGGCGCGCAAATGGCTCAGCCGCGACAACGATCATGAGGCGCAGGATCGGGGGGAACTCGCCCGGCTCGAACGGGAATGGAATGCAGGGCAGGCAGAGGAGCAGACCCATGGCTAA
PROTEIN sequence
Length: 1073
MHRFFVYNPVFAWVIAAFVSLFGVICLVMLPIEQYPDVAPPSLTLSITYTGADAETLDRNVTSIIEKEMNGVENFLYMASTSRSNGTAEVKVTFRPGTNLDIAQTQVQDRLSRVEPRLPQEVRQVGIGVTKSSSGFLMLIALTSKSGNTPAVELGNYASTRIMDEIRRVPGVGDVLLFGTPYAMRIWLDPEKLAGYGLSASEALAAVQEQNSQTAGGGLGEQPITRSAEFTAKILTQNRFSSPDQFREIIVRANPDGSSIRLGDVAKVELGSENYGFRLTLDGKESAGMAIQLASGANALAAAEAVRAVMAVLETSFPPDMGWTVPYDTTPFINASVENVVVTLVEAMVLVFLVMFVFLQNWRSTFIAAVVVPIALAGACLGLWLFGFSINTLSLFGMVVAIGILVDDAIVVVENVERIMAEEGLPPRLATVKAMRQITGALVGITLVLVAVFVPMAFFPGSTGGIYRQFSVTLAVSIFFSFVLAVTLTPALCATLLKPHAHGGEGGVSEPAPGLRGLPRRLGNGFNQRFGRATEKYARTVGTMLSAPVRWLAVFIVMVGVTLLLFGRLPGGFLPTEDQGVVLVNFDAAPGATLQRTAEATEQAEAWLQQQPEVRSVVTVVGFNFFSQGQSSALSFVDLKPWNERTGAGASAEALITRANAAFSTIPVATIFGLSPPPIPALGNAVGFSMKIEDRGGLGTAALEQARGQILVEAAQHPLLAGVRPEGPPPAPQLYVDIDRIEARALGLQIADVNQTLSIAFGSAYANDFVREGNVLRVYIQAGAEQRMTPEHILALRVRNDQGEMVPFSSFTSVKWRSGPQQLERYNGYPALTISGQAAPGESSGAALEAMEKIANSVLSGGQRFEWTGTAYEEKQAGSQIGLLLGLSLVVIFLLLAALYGSWAIPLSVLLIVPFGVLGAVVFSMLRGFPADVYFNVGLITVIGLAAKNAILIVEFAMDEERLGRDALTATTEAARLRLRPILMTSFAFILGMVPLVIASGAGAASRQAVGTGVAGGMLVATLLGLFFTPVFYVAARKWLSRDNDHEAQDRGELARLEREWNAGQAEEQTHG*