ggKbase home page

scnpilot_p_inoc_scaffold_2631_1

Organism: SCNpilot_P_inoc_Thiobacillus_63_16_multi

partial RP 38 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 2
Location: 2..229

Top 3 Functional Annotations

Value Algorithm Source
RNAse E (EC:3.1.4.-); K08300 ribonuclease E [EC:3.1.26.12] id=12493113 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 76.0
  • Bit_score: 145
  • Evalue 2.40e-32
RNAse E (EC:3.1.4.-) similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 75.0
  • Bit_score: 83
  • Evalue 3.20e-14
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=292415 species="Bacteria; Proteobacteria; Bet similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 75.0
  • Bit_score: 83
  • Evalue 1.60e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 228
GTCGATGCGACCGAACACAGTGAGGCATCGCGCCCACGTCGCCGCCGTCGCCCCACGGTCAATCAGGAGGTCGAGACCGTCAGCCTGATGCAGGTGGAAACCACCACCCCCGTAACGAGTGCCGTCGAAGTGGCCACCGCGGCGCCGCATCCCACCCGTCGGCGCTCGCGCCCACAGGTGCCGCCGCCCCAGGAACCCCTGGTACAGGTGGAAACGCAGTCGAATTGA
PROTEIN sequence
Length: 76
VDATEHSEASRPRRRRRPTVNQEVETVSLMQVETTTPVTSAVEVATAAPHPTRRRSRPQVPPPQEPLVQVETQSN*