ggKbase home page

scnpilot_p_inoc_scaffold_2063_3

Organism: SCNpilot_P_inoc_Thiobacillus_63_16_multi

partial RP 38 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 2
Location: comp(3165..3536)

Top 3 Functional Annotations

Value Algorithm Source
phage transcriptional regulator AlpA id=12498574 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 116.0
  • Bit_score: 167
  • Evalue 9.70e-39
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:CBH97702.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 114.0
  • Bit_score: 163
  • Evalue 2.00e-37
phage transcriptional regulator AlpA similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 94.0
  • Bit_score: 136
  • Evalue 6.70e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 372
ATGAATGACATCCCATCGAAGCGAGTAACTGTTCGCGAGCGTGCCGCGCATGACGCCTGTCGCCCCGAGGACGACAAGTTACCGCATCTACTGCCCAAGAGCCCTCTCCCATTCCAACGCACCATTCGACGCACCGAGTTGCGTCAGCTGGTGCCACTGGCCGATACCACGATCTACGATATGGAGAAACGCGGCGAATTCCCGCGCCGCTTCAATCTGACGGCGCGCTGCGTGGTGTGGGACCTGGCAGAGGTAGAGGCCTGGATAGCTGCGCGGCGGCAGGCTTCCTATACAGATCAACTGAAGCGGGCGCCGGCACCCGATGTTCGCCAACGCAAGCGCCGCCCCGTCAAAGCAATGCCTGGGTCGTGA
PROTEIN sequence
Length: 124
MNDIPSKRVTVRERAAHDACRPEDDKLPHLLPKSPLPFQRTIRRTELRQLVPLADTTIYDMEKRGEFPRRFNLTARCVVWDLAEVEAWIAARRQASYTDQLKRAPAPDVRQRKRRPVKAMPGS*