ggKbase home page

scnpilot_p_inoc_scaffold_2063_16

Organism: SCNpilot_P_inoc_Thiobacillus_63_16_multi

partial RP 38 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 2
Location: 12756..13784

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Herbaspirillum sp. CF444 RepID=J3DLF7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 294.0
  • Bit_score: 496
  • Evalue 1.90e-137
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL94379.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillu similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 294.0
  • Bit_score: 496
  • Evalue 2.70e-137
bacterial regulatory helix-turn-helix, lysR family protein similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 302.0
  • Bit_score: 494
  • Evalue 2.70e-137

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum sp. CF444 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGGTAGGCAGGTTGTGTTATGAAATAAAATGGTATTGTTTCAACAGTCGATTAGTTTTGTTCATTGATACCATGCTGGAGAAAATTCACTTGGCCATCGTCCGGGAGGTGGAGCGGCAGGGCTCGCTGACGGCGGCGGCCGGCGTGCTGTGTCTGACCCAGTCCGCCTTGAGCCATACCATGAAAAAGCTCGAAACGAACCTGGGCACGGACATCTGGCTGCGGGAGGGGCGCAGCCTCAGGTTGACCCAGGCCGGCCAGTACCTGCTCGCAGTCGCCAACCGGGTGCTGCCGCAACTGGAGCACGCGGAAGCGCGCATGCGCCAATACGCCCAGGGCGAGCGCGGCACGCTGCGCATCGGCATGGAGTGCCATCCCTGCTACCAGTGGCTGCTCAGGGTGGTGTCGCCCTACCTGTCCGACTGGCCCGACGTGGATGTGGACGTCAAACAGAAGTTCCAGTTCGGCGGCATTGGCGCGCTATTCGGCTACGAAATCGACCTCTTGGTGACGCCGGATCCGCTGTACAAGCCCGGCTTGCGCTTCGAGCCGGTGTTCGACTACGAGCAGGTGCTGGTGGTGGGGCGCCAGCACCCGTTGGCGGCGGCCTCGCATGTCGAGCCGGAACAACTAAGCGGCGAAGTGCTGATCACATATCCGGTCGAGATCGAGCGCCTCGACATCTACACCCAGTTCCTGATGCCGGTGGGCATCCAGCCCAAGCGCCACAAGGTCATCGAAACGACCGACATCATGCTGCAGATGGTGGCGAGCGGCCGGGGCGTGGCGGCCCTGCCGCGCTGGCTGGTGGAAGAATACGCCGGCAAAGTTGAAGTGGTTACGGTTCGCCTGGGACGCCAAGGCATCGCCAAGCAAATCTTCCTGGGCGCGCGCGAGACGGACATCGACATCGATTACCTGAAAGCGTTTGTCGAACTGGCACGCCGGCCACCGGAAATGCTTTCGACCGGGCACGGGAAAAACAGAGCAAAGCTCGCGAAAGCGTCGCGGCGCCGAAATCGTCGATAA
PROTEIN sequence
Length: 343
MVGRLCYEIKWYCFNSRLVLFIDTMLEKIHLAIVREVERQGSLTAAAGVLCLTQSALSHTMKKLETNLGTDIWLREGRSLRLTQAGQYLLAVANRVLPQLEHAEARMRQYAQGERGTLRIGMECHPCYQWLLRVVSPYLSDWPDVDVDVKQKFQFGGIGALFGYEIDLLVTPDPLYKPGLRFEPVFDYEQVLVVGRQHPLAAASHVEPEQLSGEVLITYPVEIERLDIYTQFLMPVGIQPKRHKVIETTDIMLQMVASGRGVAALPRWLVEEYAGKVEVVTVRLGRQGIAKQIFLGARETDIDIDYLKAFVELARRPPEMLSTGHGKNRAKLAKASRRRNRR*