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scnpilot_p_inoc_scaffold_2380_3

Organism: SCNpilot_P_inoc_Thiobacillus_63_16_multi

partial RP 38 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 2
Location: 2161..3396

Top 3 Functional Annotations

Value Algorithm Source
acrA1; cation/multidrug efflux system, mebrane-fusion component AcrA; K07799 putative multidrug efflux transporter MdtA id=12493015 bin=THIO_HI species=Curvibacter lanceolatus genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 412.0
  • Bit_score: 801
  • Evalue 3.40e-229
  • rbh
RND transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 421.0
  • Bit_score: 400
  • Evalue 4.90e-109
RND transporter MFP subunit {ECO:0000313|EMBL:AGW88962.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia picket similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 421.0
  • Bit_score: 400
  • Evalue 2.40e-108

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Taxonomy

Ralstonia pickettii → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
ATGGGCTCCTCCGCCGCGCCGCCTCTCCGCCCGCGCCATCCTGTCCGTACCGCCCTGATCGCCGCCGTGCTGGCCGGCCTGATCGGCGGGGTCTGGTACTGGAGCGATCACCTTGCCCCGCCGTCCGCTGCCCCGGGTGCGGAGAAAAAAGGTCGCAAAGGCGCGGGCAACAGCCATCCGCAACCGGTTTCGGTGGCGGCAGCCCGTAAAACCGATATCCGTGTCTGGCTGAATGCCCTCGGCACGGTCACCCCCGTCGATCTGGTCACCGTCCACGCCAAGGTCGACGGCACGCTGCTCAGCGTAAATTTCCGCGAAGGCCAGATGGTCAGGGCGGGGCAACTGCTGGCCCGGATCGACCCACGCCCGTTCCAGATCCAGCTCGACCAGGCCAGCGGACAGTTGCAGCGCGACAGCGCGCTGCTCGACAACGCCCGCATCGACCTCGCCCGCTACCGGCAGCTCCTCGCCAAGGACGCCATCGCCAGCCAGCAGGTGGATACCCAGGATGCCCTCGTGCGCCAGTATCAGGGCACGGTGGAGACGGATCGCAGCCAGGTGGACAATGCCAGGCTGCAACTGGAATGGACCCGCGTCGTCGCCCCGTCATCCGGCCGCATCGGCCTGCGCCAGATCGACCCCGGCAACCAGGTGCACGCAAACGATGCCAACGGGCTGGCCAGCATTGCCCGGTTGCAGCCGACCACCGTGCTGTTCGCCGTGCCGGAGGCGAATCTGGCGGCCATCCACCGCGGAGCATCGGCGCATGACGCCCTCCACGTCGAAGCCTGGGACCGCGAGCAGAAAAACCACCTGGCGGATGGCCAGCTCCTCACGACCGATAACCAGATCGATACGGCCACGGGCACCCTCAGGATCAGGGCCGGATTCGCCAATCGCGACAACGCACTGTTCCCCAACCAGTTCGTCAACATCCGTCTGCTGCTGGGCACGCTGCCCCAGGTGCTTGCCGTGCCGGCCGCAGCGATCCAGCGTGGCGAGCAAGGCAGCTTCGTCTACCGCGTCAACGCGGACGGCATCGTAGCGAGGGTTGCGGTCGTGCCCGGCGCGCAGGATGGGGACTGGGTGGCCATCGAGGGCACGATCGAGGCCGGGGACAGGGTGGTGATCGACGGCACCGACAAACTGCGCGACGGCGCCAGGGCCGAGATCATCGTTCCCGGCAGCCCGGCCCGGGGGCGCAAGCCGGCGATCAGGTCCGGGCAGCAATCGTGA
PROTEIN sequence
Length: 412
MGSSAAPPLRPRHPVRTALIAAVLAGLIGGVWYWSDHLAPPSAAPGAEKKGRKGAGNSHPQPVSVAAARKTDIRVWLNALGTVTPVDLVTVHAKVDGTLLSVNFREGQMVRAGQLLARIDPRPFQIQLDQASGQLQRDSALLDNARIDLARYRQLLAKDAIASQQVDTQDALVRQYQGTVETDRSQVDNARLQLEWTRVVAPSSGRIGLRQIDPGNQVHANDANGLASIARLQPTTVLFAVPEANLAAIHRGASAHDALHVEAWDREQKNHLADGQLLTTDNQIDTATGTLRIRAGFANRDNALFPNQFVNIRLLLGTLPQVLAVPAAAIQRGEQGSFVYRVNADGIVARVAVVPGAQDGDWVAIEGTIEAGDRVVIDGTDKLRDGARAEIIVPGSPARGRKPAIRSGQQS*