ggKbase home page

scnpilot_p_inoc_scaffold_119_88

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 91488..92189

Top 3 Functional Annotations

Value Algorithm Source
Putative ECF-family RNA polymerase sigma factor n=4 Tax=Bordetella RepID=K4QEG6_BORBO similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 231.0
  • Bit_score: 295
  • Evalue 5.80e-77
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 231.0
  • Bit_score: 295
  • Evalue 1.60e-77
Putative ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CCN22541.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 66.2
  • Coverage: 231.0
  • Bit_score: 295
  • Evalue 8.20e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGCCAGCGCGCGCACACCCCAACCCGGCGCCCGCAAGCCGCGCCATGCCCGAGCCCGAACTCATCGCCCGCGCGGCGGCAGGCGACGCCAGGGCCTTCGAGGCCATCATGCGGCGCCACAACCAGCTCTTGTTTCGCACCGCGCGCAGCATCTTGCGGAGCGACCCCGAGGCCGAAGACGCGCTGCAGGAGGCCTACCTGCGCGCCTGGCAGGCGCTGGGGGGCTTTCGCGCCGACGCCCAGCTTTCGACCTGGCTGGTGCGCATCGTGGCCAACGAGGCCCTGGGACGCCTGCGCCGCAAGAGCGCCGAAGTCATCCCCCTGGAGGCTGCCATGGCCGCACCCGACCCCGACATCCAGGCCGCCCTGGCGGCCGCGCCCCAGCAGGCACCGGAACACCAGGCACAGCGCGCCCAACTGCGCGGCATCCTGGAGTCGCGCATCGACATGCTGCCGCAGACGTATCGCACCGTCTTCATGCTGCGTGCCGTGCAAGAGATGGAAGTCGCCGAGGTGGCGCAGGCCCTGGGCATTCCGGAATCCACGGTGCGCACGCGGTTCTTCCGCGCCCGCGGCCTGCTGCGCGAGGGCCTGGCCAGCGCCATCGACGTGACCCTGCCTGACGCCTTTGCCTTTGACGGCGCGCGCTGCGACCGCATCGTCGCCGGGGTGCTGGCGCGCGCCAGCATGCGGGGGCGCTAG
PROTEIN sequence
Length: 234
MPARAHPNPAPASRAMPEPELIARAAAGDARAFEAIMRRHNQLLFRTARSILRSDPEAEDALQEAYLRAWQALGGFRADAQLSTWLVRIVANEALGRLRRKSAEVIPLEAAMAAPDPDIQAALAAAPQQAPEHQAQRAQLRGILESRIDMLPQTYRTVFMLRAVQEMEVAEVAQALGIPESTVRTRFFRARGLLREGLASAIDVTLPDAFAFDGARCDRIVAGVLARASMRGR*