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scnpilot_p_inoc_scaffold_600_57

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(56961..57491)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICD6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 175.0
  • Bit_score: 346
  • Evalue 1.70e-92
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 175.0
  • Bit_score: 346
  • Evalue 4.70e-93
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJE51287.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 175.0
  • Bit_score: 346
  • Evalue 2.30e-92

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Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
CAGCCGGGGCGCAAGATCATCTTCATCATCTGGGCGGGGGCGGGCAACCCGTTCAAGATCGCCGACCTGGACTTGAAGCGCTACGGCATCGAGATCGCCACGGGCGGCAACATCCTGCCAGCCATGGCCAGCTACAAGAACTTCCCCGGCATGGAGGGCGCGACGTACTACTACTTCGGCATCCCCAAGAACCCGGCGAACGAGGCGCTGGTGTCCATGCACTACAAGCAGTTCCAGACCCCGCCGGACTTCTTCACCGCGGGCGGCTTCTCGGCGGCCATGGCCCTGGTCACGGCCCTCAAGGCCACCAATGGCGACACCAACACCAACAAGCTCATCAAGACCATGGAAGGCATGAGCTTTGACACGCCCAAGGGCAAGATGACCTTCCGCAAGGAAGACCACCAGGCCATGCAGAGCATGTACCACTTCAAGATCAAGGTGGACCCGGCCTTTGCCTGGGGCGTGCCCGAGCTGGTGCGCGAGATCAAGGCCGAGGAAATGCAGGTGCCGATCCGCAACAAGCGCTAA
PROTEIN sequence
Length: 177
QPGRKIIFIIWAGAGNPFKIADLDLKRYGIEIATGGNILPAMASYKNFPGMEGATYYYFGIPKNPANEALVSMHYKQFQTPPDFFTAGGFSAAMALVTALKATNGDTNTNKLIKTMEGMSFDTPKGKMTFRKEDHQAMQSMYHFKIKVDPAFAWGVPELVREIKAEEMQVPIRNKR*