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scnpilot_p_inoc_scaffold_9_2

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(1722..2471)

Top 3 Functional Annotations

Value Algorithm Source
Putative response regulatory protein ypdB n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GJZ2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 235.0
  • Bit_score: 352
  • Evalue 2.50e-94
  • rbh
Putative response regulatory protein ypdB {ECO:0000313|EMBL:CCH54217.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BU similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 235.0
  • Bit_score: 352
  • Evalue 3.50e-94
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 232.0
  • Bit_score: 262
  • Evalue 9.70e-68

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Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 750
ATGTGCTCTAAATCCTGGTATCCGACCATCCGCGATATGTCTACGAAGCCATATTCCTGCATCATTGTCGACGACAATGAGATCGACAGGCTGACTGTGCTGGCACATGCCCGGCGCTGTAAGACGCTGCAGATCGCTGGCATATTTCAGTCGGCTTCCGAAGCCCTGCTCTTTCTCCAAAACAGAAACGTGGACATTCTGCTGCTGGATATCGACATGCCCGAAGTGAATGGGCTTGAATTGCGACGCCGACTGATGCAAGTCCCGGCATGCATATTTATTACCTCCTATCCCGACTATGCGGCGGATAGCTTTGCGGTCGACGCCTTTGATTATCTGGTCAAACCCATTCATGCCGATCGATTTGCCCACACCATCACACGTCTGGAGCTTTTTTTTGAAATAAAAAATAAAGCTCGGTTGTTCGACCTGAGTCTGGGGGCCGAAACGATTTTTGTCAAGGACGGCCATCAGCAGATTAAGCTGAACCTTTATGAAATCGTCTACCTGGAAGGTTTAAGGGATTATACCCGTATAGTTACGTCCGAACGCCAGTACACCGTGCTGGCCTCCATCGGCAACCTGTTACAGCAAAGGCCCTTCCAATCCTTTTTGCGCGTTCACAGGAGCTATGCTGTACAGCGGCACTACATTGACCGTATCGATGCACACCATATTTACGCCCGGCAATTTATGTTGCCAGTGGGTCGTAGTTATCGCGCCGTGCTGGAATCGATAAGTGCCCGGTAA
PROTEIN sequence
Length: 250
MCSKSWYPTIRDMSTKPYSCIIVDDNEIDRLTVLAHARRCKTLQIAGIFQSASEALLFLQNRNVDILLLDIDMPEVNGLELRRRLMQVPACIFITSYPDYAADSFAVDAFDYLVKPIHADRFAHTITRLELFFEIKNKARLFDLSLGAETIFVKDGHQQIKLNLYEIVYLEGLRDYTRIVTSERQYTVLASIGNLLQQRPFQSFLRVHRSYAVQRHYIDRIDAHHIYARQFMLPVGRSYRAVLESISAR*