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scnpilot_p_inoc_scaffold_140_26

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(43203..43751)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYT8_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 181.0
  • Bit_score: 340
  • Evalue 9.50e-91
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 92.3
  • Coverage: 181.0
  • Bit_score: 340
  • Evalue 2.70e-91
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT93443.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 181.0
  • Bit_score: 340
  • Evalue 1.30e-90

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 549
ATGTTTCAGGATGGCGATGAAGAAGCCTATACGAAACTTTACCGGCTCTATATCAAAGATATGTACCGTTACGGATCCAGCCTCGTGGCGGCATCCGATGCGTTTGTAATGGACTGTATCCACGATGTTTTTACAGAAATGTGGGTAAAGCGCGAGCGGCTTTCGGTACCGGTCCATGTGAAATATTACCTGCTCAAAGCATTGAAGACCCGGATTATCCATCTTCTGGAACGAAAGGAGCGGCCTTTTACGCCCTTGTCGGAAATCGATCTGGAAATCTTCGACCCGGAAGATTTTGAGATACTCGAAGAGCTGGATATGGCAGCATCCAGGCAGGACAAGCTCACCACGCTTATTTCCAGGCTGCCGCAGCGCCAGCAGGAGGCGATCAAGCTGCGGTTTATCGAAAACCTGAATTACAGTCAGATCGGCGACATCCTGCAAATGAATACCCAATCCGCCAAAAACCTTGTTTTTCGTGCGGTAGAAAAGCTTCGCGGCTGGATTATCCTCCCGGTTATTCACTTTTTTAATATTTTTTTGGGTTAA
PROTEIN sequence
Length: 183
MFQDGDEEAYTKLYRLYIKDMYRYGSSLVAASDAFVMDCIHDVFTEMWVKRERLSVPVHVKYYLLKALKTRIIHLLERKERPFTPLSEIDLEIFDPEDFEILEELDMAASRQDKLTTLISRLPQRQQEAIKLRFIENLNYSQIGDILQMNTQSAKNLVFRAVEKLRGWIILPVIHFFNIFLG*