ggKbase home page

scnpilot_p_inoc_scaffold_140

Search features with annotation key words

Displaying items 1-30 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_140_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(257..1873)
DNA (1617bp) protein (539aa)
SSS sodium solute transporter superfamily n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6E7_DYAFD
SSS sodium solute transporter superfamily protein
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:ACT94287.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter ferm
scnpilot_p_inoc_scaffold_140_2
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1969..3903)
DNA (1935bp) protein (645aa)
esterase n=1 Tax=Dyadobacter beijingensis RepID=UPI00036A4930 rbh
esterase
Esterase {ECO:0000313|EMBL:AKD53834.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
scnpilot_p_inoc_scaffold_140_3
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3962..5650)
DNA (1689bp) protein (563aa)
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:AEE48401.1}; EC=3.2.1.55 {ECO:0000313|EMBL:AEE48401.1};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospirace
xylan 1,4-beta-xylosidase n=1 Tax=Spirosoma luteum RepID=UPI000363C00B rbh
alpha-N-arabinofuranosidase
scnpilot_p_inoc_scaffold_140_4
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5682..9809)
DNA (4128bp) protein (1376aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037FBAA8 rbh
AraC family transcriptional regulator
Two component transcriptional regulator, AraC family {ECO:0000313|EMBL:ADB38142.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma
scnpilot_p_inoc_scaffold_140_5
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9977..11794)
DNA (1818bp) protein (606aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037AD616 rbh
Glycan metabolism protein RagB {ECO:0000313|EMBL:KJF45120.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacteri
SusD/RagB family lipoprotein
scnpilot_p_inoc_scaffold_140_6
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11809..15057)
DNA (3249bp) protein (1083aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035FE05D rbh
TonB-dependent receptor {ECO:0000313|EMBL:KJF45119.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp.
TonB-dependent Receptor rbh
scnpilot_p_inoc_scaffold_140_7
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15476..17734
DNA (2259bp) protein (753aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000380F75C rbh
Signal transduction histidine kinase {ECO:0000313|EMBL:EJG02567.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavo
histidine kinase
scnpilot_p_inoc_scaffold_140_8
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18494..20059
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037AE373 rbh
signal transduction histidine kinase rbh
Signal transduction histidine kinase {ECO:0000313|EMBL:ACT96650.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentan
scnpilot_p_inoc_scaffold_140_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20155..21009
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000364DE42 rbh
Putative hydrolase {ECO:0000313|EMBL:GAO44697.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter pet
hypothetical protein
scnpilot_p_inoc_scaffold_140_10
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21081..22460
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037D5ACA rbh
Putative two-component response regulator {ECO:0000313|EMBL:GAO44695.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" sour
Fis family transcriptional regulator
scnpilot_p_inoc_scaffold_140_11
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22616..23599
DNA (984bp) protein (328aa)
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VTN8_DYAFD rbh
Alpha/beta hydrolase fold-3 domain-containing protein
Alpha/beta hydrolase fold-3 domain protein {ECO:0000313|EMBL:ACT92981.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_p_inoc_scaffold_140_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23623..24399
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VTN9_DYAFD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92982.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_140_13
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24485..25027
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037C925F
Uncharacterized protein {ECO:0000313|EMBL:GAO44696.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_p_inoc_scaffold_140_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25241..26041
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003726EA4
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACT92978.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter ferment
scnpilot_p_inoc_scaffold_140_15
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26043..26891
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000370207B rbh
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACT92979.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter ferment
scnpilot_p_inoc_scaffold_140_16
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26870..27562)
DNA (693bp) protein (231aa)
Nudix-like regulator n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7Y210_9BACT rbh
Nudix-like regulator {ECO:0000313|EMBL:EMS34777.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK
NUDIX hydrolase
scnpilot_p_inoc_scaffold_140_17
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27640..29271
DNA (1632bp) protein (544aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC
Carboxylesterase type B n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EG59_RUNSL rbh
carboxylesterase type B
scnpilot_p_inoc_scaffold_140_18
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29320..29919)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L634_HALH1
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
scnpilot_p_inoc_scaffold_140_19
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30073..32481
DNA (2409bp) protein (803aa)
Macrolide export ATP-binding/permease protein macB n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GDD5_9BACT rbh
Macrolide export ATP-binding/permease protein macB {ECO:0000313|EMBL:CCH51909.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisom
hypothetical protein
scnpilot_p_inoc_scaffold_140_20
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32585..34222
DNA (1638bp) protein (546aa)
ABC transporter related n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1E5_DYAFD rbh
ABC transporter related {ECO:0000313|EMBL:ACT92002.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
ABC transporter rbh
scnpilot_p_inoc_scaffold_140_21
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34309..35577)
DNA (1269bp) protein (423aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYT3_DYAFD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACT93438.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_p_inoc_scaffold_140_22
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(35611..36873)
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYT4_DYAFD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93439.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_p_inoc_scaffold_140_23
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(36924..38624)
DNA (1701bp) protein (567aa)
RagB/SusD domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYT5_DYAFD rbh
RagB/SusD domain protein {ECO:0000313|EMBL:ACT93440.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fe
RagB/SusD domain-containing protein rbh
scnpilot_p_inoc_scaffold_140_24
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(38637..41957)
DNA (3321bp) protein (1107aa)
TonB-dependent receptor plug n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYT6_DYAFD rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:ACT93441.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacte
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_140_25
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(42046..43143)
DNA (1098bp) protein (366aa)
Anti-FecI sigma factor, FecR n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYT7_DYAFD rbh
FecR anti-FecI sigma factor
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ACT93442.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strai
scnpilot_p_inoc_scaffold_140_26
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(43203..43751)
DNA (549bp) protein (183aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYT8_DYAFD rbh
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT93443.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacte
scnpilot_p_inoc_scaffold_140_27
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(43891..45306)
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003704F92 rbh
hypothetical protein
Outer membrane protein-like protein {ECO:0000313|EMBL:ACT91972.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dya
scnpilot_p_inoc_scaffold_140_28
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(45318..46646)
DNA (1329bp) protein (443aa)
biotin attachment protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000380C717 rbh
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:ACT91971.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermenta
scnpilot_p_inoc_scaffold_140_29
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(46627..48312)
DNA (1686bp) protein (562aa)
ABC transporter related n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1B3_DYAFD rbh
ABC transporter rbh
ABC transporter related {ECO:0000313|EMBL:ACT91970.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_140_30
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

48457..49137
DNA (681bp) protein (227aa)
TetR family transcriptional regulator n=1 Tax=Dyadobacter beijingensis RepID=UPI00035E76D2 rbh
TetR family transcriptional regulator rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACT91969.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter ferment
Displaying items 1-30 of 156 in total

View Taxonomy