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scnpilot_p_inoc_scaffold_140

Search features with annotation key words

Displaying items 121-150 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_140_121
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(153949..154743)
DNA (795bp) protein (265aa)
Putative oxidoreductase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EJV7_9SPHI rbh
short-chain dehydrogenase/reductase SDR
Putative oxidoreductase {ECO:0000313|EMBL:EDM34229.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BA
scnpilot_p_inoc_scaffold_140_122
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(154884..155462)
DNA (579bp) protein (193aa)
TetR family transcriptional regulator n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4AB8F
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:ADZ81526.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
scnpilot_p_inoc_scaffold_140_123
unknown

Not on your lists

155701..155868
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_140_124
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

156505..158280
DNA (1776bp) protein (592aa)
Beta-lactamase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0J0_9FLAO
Beta-lactamase {ECO:0000313|EMBL:EFK33989.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATC
beta-lactamase
scnpilot_p_inoc_scaffold_140_125
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

158675..159241
DNA (567bp) protein (189aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2B1_DYAFD rbh
bifunctional deaminase-reductase domain-containing protein rbh
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ACT92084.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacte
scnpilot_p_inoc_scaffold_140_126
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

159511..160008
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VUT9_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93076.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_140_127
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

160184..160774
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000378C975 rbh
Crp/Fnr family transcriptional regulator
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACU64054.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;"
scnpilot_p_inoc_scaffold_140_128
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

160853..161440
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000362EA11 rbh
Contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ23325.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Fl
NAD(P)H dehydrogenase (quinone) rbh
scnpilot_p_inoc_scaffold_140_129
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

162340..162816
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K825_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH00278.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_p_inoc_scaffold_140_130
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

162962..163396
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FLT2_9BACT
calpastatin
Calpastatin {ECO:0000313|EMBL:AKD54360.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
scnpilot_p_inoc_scaffold_140_131
unknown

Not on your lists

comp(163859..164611)
DNA (753bp) protein (251aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_140_132
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(165239..165769)
DNA (531bp) protein (177aa)
Putative ABC transporter permease yknZ n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GDD6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD57889.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
scnpilot_p_inoc_scaffold_140_133
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(166042..167496)
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000366274C rbh
Uncharacterized protein {ECO:0000313|EMBL:KHJ38133.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter gluco
hypothetical protein
scnpilot_p_inoc_scaffold_140_134
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(167553..169010)
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035E22D6 rbh
Uncharacterized protein {ECO:0000313|EMBL:ERM80926.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 =
RagB/SusD domain-containing protein
scnpilot_p_inoc_scaffold_140_135
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(169023..172490)
DNA (3468bp) protein (1156aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000380E083 rbh
TonB-dependent receptor SusC {ECO:0000313|EMBL:KHJ38131.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_140_136
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(172548..173726)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037E2F94 rbh
Fec operon regulator FecR {ECO:0000313|EMBL:KHJ38130.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glu
FecR protein
scnpilot_p_inoc_scaffold_140_137
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(173779..174357)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000371B613 rbh
ECF RNA polymerase sigma factor SigK {ECO:0000313|EMBL:KHJ38129.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Ped
RNA polymerase sigma-70 factor, Bacteroides expansion family 1
scnpilot_p_inoc_scaffold_140_138
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

174647..175798
DNA (1152bp) protein (384aa)
Beta-lactamase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJ16_CHIPD
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ACU60100.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (stra
scnpilot_p_inoc_scaffold_140_139
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

175975..176280
DNA (306bp) protein (102aa)
Rhodanese-like domain-containing protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SRK6_9FLAO
Sulfurtransferase {ECO:0000313|EMBL:KFD40061.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str.
Rhodanese-like protein
scnpilot_p_inoc_scaffold_140_140
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

176473..177006
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9H6F8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR96739.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter
scnpilot_p_inoc_scaffold_140_141
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(177115..178188)
DNA (1074bp) protein (358aa)
arsenic resistance protein ArsB n=1 Tax=Cytophagales str. B6 RepID=UPI0003B65E7F
Arsenic resistance protein ArsB {ECO:0000313|EMBL:KIA92268.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobact
arsenical-resistance protein
scnpilot_p_inoc_scaffold_140_142
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(178192..178605)
DNA (414bp) protein (138aa)
Protein-tyrosine phosphatase, low molecular weight n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW23_DYAFD
protein-tyrosine phosphatase
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:ACT93155.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadoba
scnpilot_p_inoc_scaffold_140_143
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(178855..179400)
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW25_DYAFD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93157.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_140_144
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(179491..179820)
DNA (330bp) protein (110aa)
Transcriptional regulator, ArsR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW26_DYAFD
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACT93158.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter ferment
scnpilot_p_inoc_scaffold_140_145
unknown

Not on your lists

180043..180249
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_140_146
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

180312..180944
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW27_DYAFD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93159.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_140_147
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(181881..182285)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K2P6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG98399.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_p_inoc_scaffold_140_148
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(182582..183625)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00035DA2F3 rbh
Transcriptional regulator {ECO:0000313|EMBL:EAZ79722.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonens
LacI family transcriptional regulator
scnpilot_p_inoc_scaffold_140_149
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(183843..184859)
DNA (1017bp) protein (339aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VWT2_DYAFD
alcohol dehydrogenase GroES domain-containing protein
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ACT96832.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_p_inoc_scaffold_140_150
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(184898..185686)
DNA (789bp) protein (263aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VWT3_DYAFD
short chain dehydrogenase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACT96833.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermen
Displaying items 121-150 of 156 in total

View Taxonomy