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scnpilot_p_inoc_scaffold_140_122

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(154884..155462)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4AB8F similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 190.0
  • Bit_score: 204
  • Evalue 1.10e-49
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 190.0
  • Bit_score: 196
  • Evalue 5.00e-48
Regulatory protein TetR {ECO:0000313|EMBL:ADZ81526.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 190.0
  • Bit_score: 196
  • Evalue 2.50e-47

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Taxonomy

Sphingobacterium sp. 21 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGGGAAGGACCGTAACATTTGACCAGAACGAAGCGATCGAAAAAGCACTCGATGTTTTTTGGAAGAAAGGCTATAATGGCGCTTCGTTACGCGATTTGACCGATGCGATGAAGATCAATTCCAGCAGTTTCTATAACACGCTGGGGGACAAGCACCAGCTTTTCGTGCAGTGCGTGAAGCATTACACCCATAAAAGGCGGGTATTGCTGGAACAGCGTGCCGGGACCTATGATTCGCCACGGGCAGCGCTCGAAGGGTTTATCCATGATGTGGCAGCAGTGGTGATCAAAGACGCTCATGGCTGCTTTGCGATCAAGACGGCTTTCGAGGTTTCACCAGACGACAAGCGCATTCAGGCTTTGCTCAAAGAGGACAATAATTTTACACGCACATTCCTCAGCACCCTCATCCGGTCTGCGGTCGACCAGGGCGAAATGGCCGATGAAACTGATGCCGAGCTGCTGGCCGATTATATCATCAGCACCTACACCGGGTGGTACGAGTTGCATCTGCTGCACCAGGATCCGGTTAAAATAAACAAACTGGCGGCTTTCACCGCCAGGCAAGTGCTCCATTGA
PROTEIN sequence
Length: 193
MGRTVTFDQNEAIEKALDVFWKKGYNGASLRDLTDAMKINSSSFYNTLGDKHQLFVQCVKHYTHKRRVLLEQRAGTYDSPRAALEGFIHDVAAVVIKDAHGCFAIKTAFEVSPDDKRIQALLKEDNNFTRTFLSTLIRSAVDQGEMADETDAELLADYIISTYTGWYELHLLHQDPVKINKLAAFTARQVLH*