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scnpilot_p_inoc_scaffold_24_352

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(377546..378931)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_0 similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 460.0
  • Bit_score: 788
  • Evalue 4.70e-225
23S rRNA methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000365455B similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 460.0
  • Bit_score: 795
  • Evalue 2.10e-227
  • rbh
23S rRNA (uracil-5-)-methyltransferase RumA similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 460.0
  • Bit_score: 784
  • Evalue 1.40e-224

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1386
ATGTGCATCTGCGACAATGACGCCCCGCAACCCGCAGCTTTCCGCCACGTGGCCCGATCCAGATCCCGCATAGACAAGACCCCGTTCCAGACCGACATCCTCGACCTCAGCCATGACGGCCGCGGCGTCGCCCGCCGTGAAGGCGAGGGCGGCAAGGTGACCTTCGTGGCCGGTGCGTTGCCTGGCGAGACGGTGATGGCCGAGCAGACCGGCAAGAGCCGCCACTTCGACGAGGCGCGCACCGTGGAGGTGCTCACCGCCTCGCCGCACCGGGTGCAGCCGCGTTGCCCGCATTTCGGCGTCTGCGCCGGTTGCGTGCTGCAGCACCTGGACGAGGGCCAGCAGATCGTGGCCAAGCAGCAGGTGCTGATGGACAACCTGACCCGCATCGGCCATGTCAGCCCCGGCACGGTGCTGCCGCCGCTGGTGGGCGACAACTGGGGCTACCGGCGCAAGGGCCGTTTCTCGGTGCGCCGGGTCGAAAAGAAGGACAAGACGCTGGTCGGCTTCCGCGAGCAGGACCCGCGCTTCGTCGCCGACCTGTCGCAGTGCCTGACCGTGATCCCCGAGATCGGTACCCGGGTGGCGGCGCTGTCGGCCTTCATCGAGGGCCTGGACGGCAAGCGCGACATCCCGCAGATCGAATTCATCGGCGGCGATGCCGCCATCGCCCTGACCGTGCGCCACCTGCAGCCGCTGTCCGACGCGGACCGGCAGGCCTGGCAGGCGTTCGGCCAGCAGCATGGCTTTGCCATCTACCTGCAGCCGGGCGGACTGGAGTCGGTGCATTCGTTGTGGCCGGCCGAAGGCGTGCCGCTGTCGTTCGCGCTGCCGCAGTGGGGCGTGGAGCTGGCATTCCGCCCGCTCGACTTCATCCAGGTCAATGCCAAGCTCAACCAGCAGATGATCGCGCATGCGCTGGCGCTGCTGGACGCGCAGCCGGACGAGCGCGTGCTCGACCTGTTCTGCGGTCTGGGCAACTTCACCCTGCCGCTGGCGCGTACCGTGCGCGAGGTGGTGGGCGTGGAGGGCGAGGCCGGGCTGGTGGCGCGGGCGAAGGAAAACGCGCAGCGCAACGGGCTGGACAACGCGCAGTTCTTCGCCGCCGACCTCACCCAGGACCAGCGCGGCGCGCCGTGGATGCGGCAGGGCTTCGACAAGCTGCTGCTCGACCCGCCGCGCTCGGGCGCGATCGACGTGCTGCAGCAGCTGCCGCTCAAACAGTTCAAGCGCATCGTCTACGTCAGCTGCCACCCCGGTTCGCTGGCGCGCGACGCCGGCTACCTGGTCAATGAACAGGGCTTCACCCTGGTGTCGGCCGGTGCGATGGACATGTTCCCGCACACCGCGCACGTGGAAAGCATCGCGGTGTTCGAGAAAAAATGA
PROTEIN sequence
Length: 462
MCICDNDAPQPAAFRHVARSRSRIDKTPFQTDILDLSHDGRGVARREGEGGKVTFVAGALPGETVMAEQTGKSRHFDEARTVEVLTASPHRVQPRCPHFGVCAGCVLQHLDEGQQIVAKQQVLMDNLTRIGHVSPGTVLPPLVGDNWGYRRKGRFSVRRVEKKDKTLVGFREQDPRFVADLSQCLTVIPEIGTRVAALSAFIEGLDGKRDIPQIEFIGGDAAIALTVRHLQPLSDADRQAWQAFGQQHGFAIYLQPGGLESVHSLWPAEGVPLSFALPQWGVELAFRPLDFIQVNAKLNQQMIAHALALLDAQPDERVLDLFCGLGNFTLPLARTVREVVGVEGEAGLVARAKENAQRNGLDNAQFFAADLTQDQRGAPWMRQGFDKLLLDPPRSGAIDVLQQLPLKQFKRIVYVSCHPGSLARDAGYLVNEQGFTLVSAGAMDMFPHTAHVESIAVFEKK*