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scnpilot_p_inoc_scaffold_84_23

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(23589..24131)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonada similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 178.0
  • Bit_score: 314
  • Evalue 1.30e-82
ribosomal large subunit pseudouridine synthase E n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037DA075 similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 179.0
  • Bit_score: 321
  • Evalue 5.90e-85
  • rbh
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 178.0
  • Bit_score: 310
  • Evalue 3.80e-82

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGCTCATCGCCTTCAACAAACCCTTCAACGTACTGTGCCAGTTCACCGATCGCAGCCAGCCGCCGCGGGCGACGCTGGCCGGTTTCGGCCTGCCCGGGAACGTGTACCCGGCAGGGCGCCTGGACTACGACAGCGAGGGCCTGCTGCTGCTCACCGACGACGGTGGCCTGGCGCATCGCCTGACCGATCCGCGTCACAAGCAGGACAAGACCTATTGGGTGCAGGTGGAGGGCGTGCCGACCCGGGACATGCTGCAGGCGCTGCGCGACGGGGTGCTGCTCAATGACGGGCCGACGCTGCCGGCGCGGGTGCAGCTGCTGGAGGCGCCGCCTGCGCTGTGGCCACGCGATCCGCCGGTGCGGTTCCGCAAGACCGTGCCCGACGCCTGGCTGGCGATCACCCTGCGCGAAGGACGCAACCGCCAGGTGCGGCGCATGACCGCCGCGGTAGGCCTGCCGACGCTGCGGCTGGTGCGGGCCGCGATGGGCGCGCATGCGCTCGACGGCCTGCAGCCCGGGCAGTGGCGGCTGCTGCAGGGTTAG
PROTEIN sequence
Length: 181
MLIAFNKPFNVLCQFTDRSQPPRATLAGFGLPGNVYPAGRLDYDSEGLLLLTDDGGLAHRLTDPRHKQDKTYWVQVEGVPTRDMLQALRDGVLLNDGPTLPARVQLLEAPPALWPRDPPVRFRKTVPDAWLAITLREGRNRQVRRMTAAVGLPTLRLVRAAMGAHALDGLQPGQWRLLQG*