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scnpilot_p_inoc_scaffold_160_239

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 240734..242464

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=56458 species similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 608.0
  • Bit_score: 948
  • Evalue 4.40e-273
Transcription termination factor Rho n=2 Tax=Stenotrophomonas maltophilia RepID=B4SLA6_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 589.0
  • Bit_score: 946
  • Evalue 1.60e-272
  • rbh
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 608.0
  • Bit_score: 948
  • Evalue 8.80e-274

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Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1731
TTGTCCGAGAACACTCCTTCCGAAACCGGGAGCGCCGACGCGCCCGTCGAGAAGCGCGTGCGCAAGCCGCGTGTCGCCAAGGCCGCCGAGGCCGCCGACAGCAGCAGCCCCGCTTCCGCCCCGGCCCAGTCCGCCCTGCCGCTGCCGGCCGGCGACGCTTCCCCCGCCCCGGCCGCTCCGGCCCCGGGCAACGAAGGCCAGGCGTCCGCGCCGGCCGGCAACCCGCACGGCGGCCAGGAAGGCGGCGAGCCGCGCGACGGCAACAACAACGCCCAGCGCCATGGCCAGCAGAACCCGCAGAATCAGCAGGGCCAGGGCCAGGGCCAGGGTCAGGGCAATCGCCGCGACCGCTTCCGCAACCGCCGCGAGCGCAACCGCGACCGCTTCCGCGACGACGGCCTGCCCGGCGACAACGGCAACGAGACCTTCGTGCCGCGCCCGCACCCGTCGGTGCCGGAGGGTTTCCCGGTCTATTCGCTGAGCGATCTGAAGAAGATGCCGGCGCACAAGCTGCTGGAGATCGCCGAGCAGCTGCAGATCACCGACGGCGTGGCCCGCGCCCGCAAGCAGGACGTGATCTTCGCCCTGCTCAAGGTGCTGACCCGCCATGGCGAGGGCGTGGCCGCCGACGGCGTGCTGGAAATCCTGCCCGACGGCTTCGGCTTCCTGCGCGCGGCCGAGGCCAGCTACCTGGCCGGCCCGGACGACACCTACATCTCGCCCAGCCAGATCCGCCGCTTCAACCTGCGCACCGGCGACCACATCGCCGGCCGCATCCGCTTCCCGAAGGACGGCGAGCGCTACTTCGCGCTGAACATCGTCGACACCATCAACGGTGAGCCGATCGAAGCGTCGAAGAACAAGGTGCTGTTCGAGAACCTGACCCCGCTGTTCCCGCGCAAGCGCTTCACCCTGGAACGCGGCAACGGCTCCTCGGAAGACATCACCGGCCGCATCCTCGACCTGATGGCGCCGCAGGGCAAGGGCCAGCGCGCGCTGATCGTCTCCCCGCCCAAGGCGGGCAAGACGATGATGATGCAGCAGATCGCCACGGCCATCACCACCAACCACCCGGAAGTGCACCTGATCGTGCTGCTGGTGGACGAGCGCCCGGAAGAAGTGACCGAGATGCAGCGCACCGTGCGCGGCGAAGTGGTCTCCTCGACCTTCGACGAGCCGGCCGCACGCCACGTGCAGGTGGCCGAAATGGTGATCGAGCGCGCCAAGCGCCTGGTCGAGCACAAGAAGGACGTGGTGATCCTGCTGGACTCGATCACCCGCCTGGCGCGTGCCTACAACAATGTCGTGCCCAGCTCCGGCAAGGTACTGACCGGCGGCGTGGACGCCAATGCCCTGCACCGCCCGAAGCGCTTCTTCGGCGCCGCGCGCAACGTCGAGGAAGGCGGCTCGCTGACCATCATCGCCACCGCGCTGGTCGAGACCGGCTCGAAGATGGACGAGGTGATCTACGAAGAGTTCAAGGGCACCGGCAACAGCGAAGTGCACCTGAACCGCCGCATCACCGAGAAGCGCGTGTACCCGGCCATCGACATCAACCGTTCCGGCACCCGCCGCGAAGACCTGCTGATCGAGCCGGAGCTGCTGCAGAAGATCTGGATCCTGCGCAAGCTGCTGCACCCGATGGACGAAATCGCCGCGATGGAATTCCTGCTCGACAAGATGAAGAACACCAAGTCCAACGACGAGTTCTTCGGTTCGATGAAGCGCTGA
PROTEIN sequence
Length: 577
LSENTPSETGSADAPVEKRVRKPRVAKAAEAADSSSPASAPAQSALPLPAGDASPAPAAPAPGNEGQASAPAGNPHGGQEGGEPRDGNNNAQRHGQQNPQNQQGQGQGQGQGNRRDRFRNRRERNRDRFRDDGLPGDNGNETFVPRPHPSVPEGFPVYSLSDLKKMPAHKLLEIAEQLQITDGVARARKQDVIFALLKVLTRHGEGVAADGVLEILPDGFGFLRAAEASYLAGPDDTYISPSQIRRFNLRTGDHIAGRIRFPKDGERYFALNIVDTINGEPIEASKNKVLFENLTPLFPRKRFTLERGNGSSEDITGRILDLMAPQGKGQRALIVSPPKAGKTMMMQQIATAITTNHPEVHLIVLLVDERPEEVTEMQRTVRGEVVSSTFDEPAARHVQVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNNVVPSSGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNSEVHLNRRITEKRVYPAIDINRSGTRREDLLIEPELLQKIWILRKLLHPMDEIAAMEFLLDKMKNTKSNDEFFGSMKR*