ggKbase home page

scnpilot_p_inoc_scaffold_33_238

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(297071..299374)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C2I7_SPHS2 similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 761.0
  • Bit_score: 895
  • Evalue 3.20e-257
Contig13, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78452.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 774.0
  • Bit_score: 965
  • Evalue 6.00e-278
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 761.0
  • Bit_score: 895
  • Evalue 9.10e-258

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2304
TTGACCGTTTTATGCCTGCTGTCATATCTCACAGGCCAGGCGCAGAAAAAATATACGATCAGCGGCTATATCACCGATGCCAAAAAGGGAGAAACACTGATAGGCGCCGAGATAGAGGCCTCCGGTACAAAATCGCAGTACACCACCAGCAATGAGTATGGTTTCTATTCCATCACCATGGAGGAAGGCGCCTATAAGCTCACATTTTCCAATCTCGGCTATGAACCGACGGCAGAGAACGTCCAGTTGTCCGGGAATACCAGGCTGGACATAAAGCTCCGGGAAGAATCGGATAACGTCCTGGAAGGAGCGGGCATCTCTACACAGGCCGACAACAGCAATATCACTGATAACAGGATGGGCGTGGAAAGGATCAATGTCAAGGAGATCAATAAGCTGCCCGTATTATTCGGGGAACGGGATATCGTCAAGGCGGTGACCCTGCTGCCCGGCGTCAAGTCGGACGGTGACGGGAGCGGCTCCTTTTATGTCAGGGGCGGCGCGGCCGACCAGAACCTCGTGCTGCTGGATGAGGTGCTGGTGTACAACCCCTCCCACCTGCTGGGCTTTTTCTCCACCTTCAACTCCGATGCGCTCAAGAACGTCACGCTCTACAAAGGGAATATGCCGGCCCAGTACGGCGGCCGCCTGTCTTCGGTGATGGATGTGCAGATGAAGGACGGCAATAACCAGGATTACAGCGTCAGCGGCGGTATCGGGCTGATCTCCTCGCGCCTGCTGGTGGAAGGTCCCATCGTAAAGGACAAAGGCTCTTTTATGATCAGCGGGCGCCGCACCTATGCGGACCTGTTCCTGAAGCTGAGCAATGACACCTCCCTGCAGAAGACCATTCTCAATTTTTACGACCTGAACGCCAAGGCCAGCTATAAGATATCCGACAAGCACAGGATATTCTTCTCCGGCTACCTGGGACAGGATAACCTGGGCATCGCCAACGCATTCGGGCTGGACTGGGGCAATAAGACCGGGTCCGTACGCTGGAATTACCAGGTCAATCCCAAATTATTCTCCAATACGACAGTAGCCTATAATGATTTTGCCTATAACGTAAAAGTGGACCTGAACGTCTTCAACAGCACGATAAAATCCAGGATCAGGGATTGGTCCCTGAAGCAGGAATTCAGCTATTTTCTTAATTCACGGAATGAGATCAAGGCAGGCTTCCAGTCCGTCTATCACAAAGTCAATCCCGGCAGCTATACCGGCGACATCAACATAAGCGACCTCCCGCTGAATTACAGCTGGGAGAATGCCATTTATGCCAATAATACCTGGAAGGCTACCCCGAAGCTGACCATCGACTACGGCCTGCGGGTATCCACCTTTACTGCATTGGGAGGCGAGCAGCCTTTTTATACGCTGGATGCGAACAGGAGGGTGATCGATACGCGGTATTATGACAAGGGCGAGTTCGTACAGTCCTATATCAACCCCGAGCCCCGCTTATCGGCCAATTATATCATCAATCCTACCCTGGCCGTAAAGGCCGCCTATGCCCGGAATGCACAGTATATGCACCTGCTGTCCAATTCCGCAGCTTCCAACCCCACCGACAAATGGATACCTACCAACAATATCATCCGACCGGAACGGTCTCACCAGGTATCGCTGGGCATTGCCAAGAATTTAAAGGATAATATGTTCGCCTTGTCCCTGGAAGGCTATTACAAGACCATGGACAACCAGATAGATTATGTGGAGGGCGTTAATATCCTGAGCAATGATGCTATTGAGACCCAGTTGCTGTACGGTATCGCAAGGGCCTACGGAGCGGAATTCCTGGTAAGGAAGAATAAAGGCAAGCTGACCGGCTGGATCGGCTATACCCTCGCCCGGACAGAAAAGCAGATAGACGGCATCAACAACGGCGACTGGTATGCCGCCCGCCACGACAGGACACATGACATTTCGGTAGTGGCCATCTACGATGTCACCAAGAAGCTCACCTTATCCGGAACGTTCGTGTACTATACCGGCAATGCCGTGACGTTCCCGAGCGGGAAATATACCATAGATAACCGCACGGTCTTCCTCTATACGGAACGCAACGGCTACAGGATGCCCGCCTATCACAGGATGGACCTGAATGTCACCTACCAGCTGGGCAAGCGGAAAGGACGCTGGGAGTCGGAACTGACAGCCGGCATGTTCAATGTATATGGCCGCGAGAACGCCTATACCATCACATTTGAGGACGATCCCGACGACCCGAGCAGGACACAGGCTAAACGTACGGCCTTGTTCAAATTTGTCCCTTCCATTTCCTATAACTTTAAATTCTAG
PROTEIN sequence
Length: 768
LTVLCLLSYLTGQAQKKYTISGYITDAKKGETLIGAEIEASGTKSQYTTSNEYGFYSITMEEGAYKLTFSNLGYEPTAENVQLSGNTRLDIKLREESDNVLEGAGISTQADNSNITDNRMGVERINVKEINKLPVLFGERDIVKAVTLLPGVKSDGDGSGSFYVRGGAADQNLVLLDEVLVYNPSHLLGFFSTFNSDALKNVTLYKGNMPAQYGGRLSSVMDVQMKDGNNQDYSVSGGIGLISSRLLVEGPIVKDKGSFMISGRRTYADLFLKLSNDTSLQKTILNFYDLNAKASYKISDKHRIFFSGYLGQDNLGIANAFGLDWGNKTGSVRWNYQVNPKLFSNTTVAYNDFAYNVKVDLNVFNSTIKSRIRDWSLKQEFSYFLNSRNEIKAGFQSVYHKVNPGSYTGDINISDLPLNYSWENAIYANNTWKATPKLTIDYGLRVSTFTALGGEQPFYTLDANRRVIDTRYYDKGEFVQSYINPEPRLSANYIINPTLAVKAAYARNAQYMHLLSNSAASNPTDKWIPTNNIIRPERSHQVSLGIAKNLKDNMFALSLEGYYKTMDNQIDYVEGVNILSNDAIETQLLYGIARAYGAEFLVRKNKGKLTGWIGYTLARTEKQIDGINNGDWYAARHDRTHDISVVAIYDVTKKLTLSGTFVYYTGNAVTFPSGKYTIDNRTVFLYTERNGYRMPAYHRMDLNVTYQLGKRKGRWESELTAGMFNVYGRENAYTITFEDDPDDPSRTQAKRTALFKFVPSISYNFKF*