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scnpilot_p_inoc_scaffold_72_47

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(59410..60117)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingo similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 232.0
  • Bit_score: 193
  • Evalue 4.40e-46
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU42_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 232.0
  • Bit_score: 193
  • Evalue 3.10e-46
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 232.0
  • Bit_score: 193
  • Evalue 8.90e-47

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 708
ATGCAACTGTATTTCGAGCCGCAGCTTCGCCGGGACACTACCTTTTTTACGCTGGATGCCAATACTTCCAGGCACCTGGTACAGGTGCTGCGGATGGAGGCCGGCAGTACGATCGGGTTGACGAACGGTAAAGGGTTAAGTGCGTTGGCCGGCATCGTGGATGCAGATAAAAGGCACTGCCGGGTGGAAGTGCGATCTTTTACTATGCACGAAAAGCCGGAAGTGACGCTGACCGTGGCAGTGAGCTTTACCAAGAACAGGAGCCGGAACGAATGGATGCTGGAGAAGCTGACAGAAATAGGGGTGTCGCGCATTGTGCCGCTTGTAACCCGGAGAACGGAGAAAGAGAAATTTAATTTTGAACGGATAGAAGCGATACTGGTAGCGGCCATGCTGCAGTCCCAACAATACTTTCTGCCTGCTATCTCAGAGCCGGTGGAGCTGCGCAAAATAGAAACGGATGGATATGCCCAGAAATTTGTGGCACATTGTGAGGCGGATATGGACAGGCAATATTTACATAAGGCCTGCCAGGGTAATAAGGACACGCTGGTCTTTATAGGACCGGAGGGTGATTTTACCCCTGAAGAGATCCGCTATCTGGAAGGAAAGGACGTAACCGCTGTCAGTCTCGGGAACAGGAGGCTCCGGACTGAAACCGCAGCTATTTATGCAGCCACCATATTTAATGCGATGAACGATGCGTAG
PROTEIN sequence
Length: 236
MQLYFEPQLRRDTTFFTLDANTSRHLVQVLRMEAGSTIGLTNGKGLSALAGIVDADKRHCRVEVRSFTMHEKPEVTLTVAVSFTKNRSRNEWMLEKLTEIGVSRIVPLVTRRTEKEKFNFERIEAILVAAMLQSQQYFLPAISEPVELRKIETDGYAQKFVAHCEADMDRQYLHKACQGNKDTLVFIGPEGDFTPEEIRYLEGKDVTAVSLGNRRLRTETAAIYAATIFNAMNDA*