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scnpilot_p_inoc_scaffold_176_122

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(149910..151565)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1463156 speci similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 571.0
  • Bit_score: 665
  • Evalue 5.40e-188
Transcription termination factor Rho n=1 Tax=Niabella soli DSM 19437 RepID=H1NTZ1_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 567.0
  • Bit_score: 665
  • Evalue 6.60e-188
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 567.0
  • Bit_score: 665
  • Evalue 1.90e-188

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Taxonomy

Flavihumibacter sp. ZG627 → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1656
ATGATGCTTTTTGAGCTTCGTGACGAAGCTGTACAAAATGGCGTCAGTCCGGACAATTTAACCAGGGAAGCGCTGATTTCAGCAATACTGGAAGCACAGAAGACCGTTCCCGCCAAAACCGCTGCAAGAAAGAAAAGAGCAAGAGTGCCCAAAGCTGCTGATACCGCTGAAAATAAGGAAGACAGCCCTGTACCGGACACAGTACAGCCGGCACCGGAAGAAAAAAGCGATACCGGAACGGAAGCCGCTGCTGCCCCGGCGGCGGAAGCGCCCAAAAAGCCCCTGAAAAAAGCAAGAAAGCCCAAGGCCGCCGCTAAAGACACTGCCGAAGCGGAGAAAGCATTGCTGTTTGATATACCCGAAGCTGATGAGGCCGAAGGTGAAAAAGAAGCCGGTACGGTTCCCGCTCCTGAAGCGGTACTGCCGGAAATCCCGGTTCAGCAGGATAATGCTGCCCCGGAAACGCCGGCCCCCGTGGCTCCCGCGAAAAATGCGAACCCGCAGCAGCATAAGCACAACAGACCCGCGTTCAATATCGAATTTGAAGGCATCATCTTCAGTGAAGGTGTGCTGGAAATGATGCAGGACGGTTACGGCTTTTTAAGAAGCTCCGATTATAATTACTTAAGCTCCCCGGATGATGTGTACGTATCTCCGTCCCAGATCAAATTATTCGGTCTGAAGACCGGTGATACTGTGAAAGGTACGGTAAGGCCGCCCAAGGAAGGAGAGAAATATTTTGCCCTCCTGAAAGTGGAGAGCATTAACGGGCGCAGCCCCGAAGATATCCGTGACAGGGTGCCTTTTGACTACCTGACACCTTTATTCCCTAATGAAAGATTGAATATCGTAGGAAATACGGGAAGCATCAGTGCCCGTATCATAGATATGGTGGCACCTATCGGTAAAGGGCAGAGGGGCCTTATCGTGGCACAGCCCAAGACCGGTAAGACCATGCTGCTGAAAGAAGTAGCTAACGCCATTGCCGCCAACCACCCCGAATGTTACCTGATGATCGTGCTGATAGATGAGCGCCCGGAAGAGGTGACGGATATGCAGCGCAGCGTTAACGCGGAAGTCATTGCCTCTACTTTTGATGAGCCGGCGGAAAAGCACGTCAGGGTATCCAATATTGCCCTGCAGAAAGCCAAGCGCCTGGTGGAAGTGGGCCATGATGTAGTGATTCTGCTGGACTCCATCACCCGTCTTGCCCGTGCGCACAATACGGTAGCTCCCGCTTCCGGAAAGGTGCTGAGCGGTGGTGTGGAGGCCAATGCCATGCAAAAGCCCAAGCAATTCTTCGGTGCCGCCCGTAAGATCGAAAACGGCGGTTCGCTGACCATACTGGCCACGGCCCTGATAGATACAGGGTCCAAAATGGATGAGGTGATCTTTGAAGAATTCAAGGGAACCGGTAATATGGAATTGCAGCTGGACAGGAAGCTGGCCAACAAGCGCGTGTTCCCGGCCATTGACATTGTCAACTCGTCCACGCGCCGTGATGACCTGCTGCACGACAAGGAGACCATGACCCGCCTGTGGATGCTGAGAAACTTTATTGCAGATATGAATGCGGATGAGGCGATGCGCTTTTTACTGAAGCATATCAAATCCACCAAAAATAATGCGGAACTGCTCGCGACCATGAATAAATAA
PROTEIN sequence
Length: 552
MMLFELRDEAVQNGVSPDNLTREALISAILEAQKTVPAKTAARKKRARVPKAADTAENKEDSPVPDTVQPAPEEKSDTGTEAAAAPAAEAPKKPLKKARKPKAAAKDTAEAEKALLFDIPEADEAEGEKEAGTVPAPEAVLPEIPVQQDNAAPETPAPVAPAKNANPQQHKHNRPAFNIEFEGIIFSEGVLEMMQDGYGFLRSSDYNYLSSPDDVYVSPSQIKLFGLKTGDTVKGTVRPPKEGEKYFALLKVESINGRSPEDIRDRVPFDYLTPLFPNERLNIVGNTGSISARIIDMVAPIGKGQRGLIVAQPKTGKTMLLKEVANAIAANHPECYLMIVLIDERPEEVTDMQRSVNAEVIASTFDEPAEKHVRVSNIALQKAKRLVEVGHDVVILLDSITRLARAHNTVAPASGKVLSGGVEANAMQKPKQFFGAARKIENGGSLTILATALIDTGSKMDEVIFEEFKGTGNMELQLDRKLANKRVFPAIDIVNSSTRRDDLLHDKETMTRLWMLRNFIADMNADEAMRFLLKHIKSTKNNAELLATMNK*