ggKbase home page

scnpilot_p_inoc_scaffold_267_53

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: 60564..61097

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003604F01 similarity UNIREF
DB: UNIREF100
  • Identity: 34.9
  • Coverage: 172.0
  • Bit_score: 119
  • Evalue 3.30e-24
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 33.9
  • Coverage: 174.0
  • Bit_score: 115
  • Evalue 6.70e-23
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 32.4
  • Coverage: 173.0
  • Bit_score: 110
  • Evalue 4.40e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 534
ATGTACCAGACCATTGAATCATTTTCCCAGATCGGCAGGCTGTCCTCCACCCACGGGCTGGACGGGAGCATCGCGCTCGTGCACCGGCTTAAAGGTAAAAAGCCCTTTCAGCAACTGCCTTTCGTTTTTATTGAGCTGAGGAACAAAAGCTATATCCCCTTCCGGGTCACTTCAGCCCGGGTGCTGTCGGAAATGGATGCCATTATCCGGTTGGAAGGCATTGATACCATTGAGCAGGCCAAAAGGATCGCCGGGAAAAATGTATTCCTGCCTTCCGGTGAATATGACCGCCTGCAGCCCGCGGAACAGACGCTTGATTTCAAAGGCTTTGTACTGTACGATCAGTATGATAAAAGGACAGGCGTGGTGGATTCGGTGATAGAATATCCCGGGCAGCTTATGGCGAATGTGATACTGGTCAACGGCAATGAAGCGCTGGTCCCCATAGTGGAACAACATATTATAAACATTGATGCAAGGAAGAAAGAGCTAACTTTGCATATACCCGACGGGCTTATTGATATATACCTGTAA
PROTEIN sequence
Length: 178
MYQTIESFSQIGRLSSTHGLDGSIALVHRLKGKKPFQQLPFVFIELRNKSYIPFRVTSARVLSEMDAIIRLEGIDTIEQAKRIAGKNVFLPSGEYDRLQPAEQTLDFKGFVLYDQYDKRTGVVDSVIEYPGQLMANVILVNGNEALVPIVEQHIINIDARKKELTLHIPDGLIDIYL*