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scnpilot_p_inoc_scaffold_454_78

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: 80515..81726

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GDS0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 401.0
  • Bit_score: 298
  • Evalue 1.20e-77
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.9
  • Coverage: 401.0
  • Bit_score: 298
  • Evalue 1.70e-77
putative ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 399.0
  • Bit_score: 286
  • Evalue 1.00e-74

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Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1212
ATGGTTGCTGTTTTATCCCGGATGCTTGGGCTCAACCAGATTGATAGGATATTGGATGTTGTACAGGATACTTTTGAAACAGCTCTTTGCAAATGGAAGTTTTCGGGCATCCCGGATAACCCTTCAGGATGGCTGATGCAGGTGGCAAAAAACAAAGCGCTCAATACCATTAAACGGGAAAATAAAATCCAGGCTTTTTCAACTTCTGTTTACCGGAGTGAGGTCGATAAAAGCTTTGAAAACCAATTTGGCGGCTTGCTTTCGCCACAAGACATTAAAGATAGCGAGCTACGATTGCTTTTTGCCTGTTGTCACCCCCGGTTTTCTGTTAAAAACCAAATCATCATCACACTGAATATTCTGTGCGGATTTGGTATTCCTGAAATTGCCAATGCCTTGCTGATGAATGAAGAAGCAGTAAAAAAGGCACTGACAAGAAGCAAAGCTTCCCTTAGGGAATCGGGTAACCTGCTACAAACAAGCATCATTACCCAATCAGCAGAACGGATAAAAACCGTTCAGACCATTCTTTACCTGATGTTTAATGAAGGCTATAAAACTACCCGGGGCAAAAAAGCGATTAATAATGATTTGTGCTATGAAGCGATACGGCTGGCCAGGCTTTTAGAAAAGGATAACAGCATCGTGAGCAGCGCAACAAACGCCTTGCTGGCTTTAATGTTTTTCAACATTGCGCGTTTCCCTGCACGGCTTGATGCAAGCGATGAATGGCTTACGCTGGAAGAGCAGGACCGTAGTAAGTGGCATACAATTTTTATTGAAGAGGGTTATTATTACCTCAACATAGCAACACAATCAGCAACCGTTACCCGTTATCATATTGAAGCTATCATCGCTTCTTTGCATTGCGCAGCTCCCACTTTTGAAGCAACCGATTGGGCGAAAATTGCCCGTTTATATTACCAGCTGGAACATATAGCGCCTTCGCCGCTTGTAACGCTCAACAGGATTATCGCTGAAAGCTACCTCAGCAATGCAGACAGTATAAAAGCGCTTGACGAGCTGGCAGCACATAAAGATTTTAAAAGTAATTTTCTTATCCCGGCCGTAAAAGGCGATGTGTACAAGCGAAAAGGCGAATTTAAAATTGCCCGGGCGTTTTACGAGCAAGCATTGAGCTTGTCCGTATCACCAGCTGACAAAAAACTTTTGCAGAAGAAAATTTTGCAATGCCAACCCAATACCAACTAA
PROTEIN sequence
Length: 404
MVAVLSRMLGLNQIDRILDVVQDTFETALCKWKFSGIPDNPSGWLMQVAKNKALNTIKRENKIQAFSTSVYRSEVDKSFENQFGGLLSPQDIKDSELRLLFACCHPRFSVKNQIIITLNILCGFGIPEIANALLMNEEAVKKALTRSKASLRESGNLLQTSIITQSAERIKTVQTILYLMFNEGYKTTRGKKAINNDLCYEAIRLARLLEKDNSIVSSATNALLALMFFNIARFPARLDASDEWLTLEEQDRSKWHTIFIEEGYYYLNIATQSATVTRYHIEAIIASLHCAAPTFEATDWAKIARLYYQLEHIAPSPLVTLNRIIAESYLSNADSIKALDELAAHKDFKSNFLIPAVKGDVYKRKGEFKIARAFYEQALSLSVSPADKKLLQKKILQCQPNTN*