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scnpilot_p_inoc_scaffold_29_208

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(272352..273014)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator Tax=CG_Paludi_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 200.0
  • Bit_score: 198
  • Evalue 1.30e-47
Regulatory protein, TetR family id=4519185 bin=GWF2_Bacteroidetes_35_48 species=Polaribacter sp. MED152 genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 similarity UNIREF
DB: UNIREF100
  • Identity: 32.1
  • Coverage: 196.0
  • Bit_score: 118
  • Evalue 1.20e-23
regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 30.4
  • Coverage: 204.0
  • Bit_score: 116
  • Evalue 7.60e-24

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Taxonomy

CG_Paludi_01 → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 663
ATGGATATATTGTGTAGTTTTGAAGCTTTGTATTACCTTTGCGCGACTTTTACAATTATGAGAGAAAACATTATACAGATTGCGCTTAGTCAGTTTCATCAACTGGGCATCCGGAGTGTTTCGGTTGATGACATTTGCGCTACCCTGCGAATTTCAAAAAAAACTTTTTATCAGTATTTCAAGAAAAAGGAAGACCTGATAGAAGAAATTATCCAGCATGTTCAGCAGCATTTTGTAGCGCGTTGTATGCGTCAGCAGAAGGATAAAAACTCGATCGACATTCTCATCATGAACATCCGCGAAATTAAGCGGGCCATGGAGAAGGAATCGTTTTTGTTTTGGCACGATCTGAAAAAGTATTATCCTTTGTTGTATTCGAGGTATTACGATTTGCAGCGTGATGTCGTGCGTACGACCTTTGAGCAGAACATCCGTTGCGGAATGGAGGAAGGGTATTACAGAAAGGATATCGATGTTGAAATGTTATCGTATTTTCACACGGTTCAAATGCGTCATACTTTTGAAGCGATGATCGAGGATCAGCAGCATTTCCCTTTGAAAAGGGTGGTCGATTTCTTTATCGATTTGATGGTACATTTAATAGTCAATGAAAAGGGTTTGAAATATCTGGAAGAAAATTATTACGACAAAATTAAAAAATGA
PROTEIN sequence
Length: 221
MDILCSFEALYYLCATFTIMRENIIQIALSQFHQLGIRSVSVDDICATLRISKKTFYQYFKKKEDLIEEIIQHVQQHFVARCMRQQKDKNSIDILIMNIREIKRAMEKESFLFWHDLKKYYPLLYSRYYDLQRDVVRTTFEQNIRCGMEEGYYRKDIDVEMLSYFHTVQMRHTFEAMIEDQQHFPLKRVVDFFIDLMVHLIVNEKGLKYLEENYYDKIKK*