ggKbase home page

scnpilot_p_inoc_scaffold_20_107

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(154144..157149)

Top 3 Functional Annotations

Value Algorithm Source
TonB-linked outer membrane protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237B8F7 similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 990.0
  • Bit_score: 1345
  • Evalue 0.0
  • rbh
SusC, outer membrane protein {ECO:0000313|EMBL:GAO29698.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 1 similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 968.0
  • Bit_score: 1362
  • Evalue 0.0
Outer membrane receptor proteins, mostly Fe transport similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 999.99
  • Bit_score: 1235
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3006
ATGAAAATCAGAAAAGAAAAACACGGTACGAGCGTGTCGGTCCTCAGGAGGAAGGCACGATCGTTTGCACTCCTTGTACTGATGATGGCGATAACCTTGCCGGCAGCGGCTCAAAAACGAGCTGTGAGCGGCACTGTTACCGATGCCGGCGGGGAGGCGATTATTGGAGCGAACATCCTGGTTAAAGGTACCACAACAGGTACGGTAACCGATTTAGACGGCAAATTCAGAATTGAAGCATCCACCGGAGATGTACTGATAATCAGCTACATCGGAACGATTTCGAAAGAGATTCCGGTAGTAAACAACACGAGTGTGTACAATGTACAACTGCTCGACGACACTCAAAAGCTGGAAGAGGTAGTCGTTATCGGTTATGGTACGGTGAAGAAAAAAGACGTCACCACGGCTATCACCACTATTTCGACCGACGATCTCGATCAGCGCCCCATTGTCACTGCTGCCCAGGCGCTGCAGGGTAAAGCCGCCGGGGTTTCGGTGGTACGCCCGAGCGGTGCGCCAGGCGCCGGGTTGGCCATCCGTGTGCGCGGTACCACCTCCATGAACTCGAGCAACGACCCCTTGTACGTAGTGGACGGAGTAACTCTCGACGATATCTCCTTCCTGTCGTCGAACGATATTGCCAGCATGCAGATTCTTAAAGATGCTTCGTCGGCAGCCATTTACGGTTCGCGCGCCGCCAACGGGGTGGTGCTGATCACCACCAAAAACGGAGCGGCAGGTAAAGCTAGGATCAGTCTGAATGCCTACACTGGGCTCACCAGCCTGACCAATAAAGTGGCGGTACTGAATACCACCCAATACCGCGAGTTATTGTCGGATATGGGGTCGACCACGGCTCTGCCCGACAACCTGACCGACCAGACCGACTGGTACAAAGAAACCTTTCAAACTGCGATGACTCAAAACTACCAGCTCTCGGTTTCCAATGCCACCGATAAACTTAACTATTACGTTTCGGCAGGATATACCGGCGAAGAAGGGATTATCAAAGTAGCCTATTTCGACCGGTTCAACTTCCGTTCGAATATTGAAAATCAGATCCGTCCGTGGCTGAAAATCGGAGCCAATATTTCCTATTCCGATTATACCAGCAACGGTATTATTTCAGGACAGGGCGCCAACCGTGCAGGAGTAGTACTATCGGTACTGAATACACCTACCTACGCACCGGTAATGGATCCCAACAACCCCACCCAATACAATACCAACTTCTATGGTGTAAACATCACATCGCCTGTTGAAAACATGGCACGCTCGGAAGATAACAAATCGCGTAACAACCGGTTAATAAGTACCGGAAGCGCCGAAATCACCTTTCTTCCTAACTTAAAACTTCGTTCCACGGTAACCCTCGACCGCTTCTACAACCATTCCACCAGTTTTCTCGATCCGCAGAAAACGAGTTATGGCCGTAGTATGCGCGGAGTAGCCACCGACAACCGTTCGCTCACGTCCGTAATGATTTACGACAATATCCTTTCGTACAACAAAGCCTTTGGCGACCACAGCATCGACCTCATGGGCGGAACATCGGGAACAACTTCGTATTCTACCACCTCGTACCAAACCGTCACCCACTTCGAGAACGGAGCTATTAAAACCCTGAATGCCGGAAACAAAGTTTCGCAGGGCAACGGTACATTCGATGCCCACAACGCGATGATGTCGTATGTAGGACGTATTGCCTATAACTACATGAGTAAATACCTGCTTACCGCCAATATGCGTATCGACGGTTCCTCGAAACTACATCCCGATTACCGCTGGGGCTATTTCCCCTCCTTCTCGGGAGCATGGCGTATATCGTCGGAAGAATTTATGAGCGATCTAACCTGGATCGACGACCTGAAAATACGCGGAGGTTGGGGGCAAACCGGGAATACCGCCGGGCTGGGCGATCACGATTACCTGGAACATTCGTCGATTACCCGCGTAAACTGGTGGGAAACCGGCAAAGGCAATGCAATGCCCATTATCACACAGTCTTCGTTGCGCAATATTCAGTTAAGCTGGGAAAACACCACTCAAACCAATATAGGTATCGACTTTACCTTATTGAAAAACCGGCTGAGCCTGAATGTCGATTACTACTTCAAGCGCACAACCGATATGTTGATGAATGTAACATTACCTTCTGAATCAGCAGTGGCTCCATCGATCAAACGAAATGAAGGAGAAATGACCAATAGCGGATTCGAGTTTGCAGTAAATTCACGTAATCTGCAGGGGGCATTGAGTTGGAATACCGATTTTAATATTTCATTCAATAGGAATAAATTGGTCCGTCTCGATCTTACTCAGATATATTACGATGCCATGACCAGCGATGTAATCAAAGAATACATTGTGCGCAACGAACCGGGCAGGCCATTGGGAGGATTTTACGGCTACTTCACCGATGGCGTAGATCCTGAAACCGGAGAATTCATTTACCGCGACGTGAACAAAGATGGACAGCTCACTTCGTCCGACCGTACGTTCATCGGCGACCCGAATCCCGATTTCGTATATGGAATGACCAATACTTTCACTTACAAAGGACTGAACCTGAGCATCTTCTTACAGGGATCACAGGGCAACGACATTTTCAATGCTTCGCGTATTGAAACCGAAGGAATGTACGATGGTAAAAACCAATCGATCCGCGTGGTGGATCGCTGGCGGCGTCCCGGCATGGTAACTTCCATCCCGAAAGCCGGTTACGATCTGCGTGTCTCCGATTTCTTTGTCGAGGACGGCAGTTACCTGCGGGTAAAAGACATCACTCTATCGTACGATCTGGCAAAAACAGTATTGAAATCAAGTGGAATTACCCGTTTACAACCTTATTTCACCGCTTCTAACCTGTTTACCATCACCCGTTACCTGGGATTTGACCCTGAGGTTAATCAATGGGGAAATAGCGGAACTGTTCAGGGGATCGACTGGGGAACCTATCCGCAAACCCGTTCATTCATCGTAGGTGTAAACATCGAATTTTAA
PROTEIN sequence
Length: 1002
MKIRKEKHGTSVSVLRRKARSFALLVLMMAITLPAAAQKRAVSGTVTDAGGEAIIGANILVKGTTTGTVTDLDGKFRIEASTGDVLIISYIGTISKEIPVVNNTSVYNVQLLDDTQKLEEVVVIGYGTVKKKDVTTAITTISTDDLDQRPIVTAAQALQGKAAGVSVVRPSGAPGAGLAIRVRGTTSMNSSNDPLYVVDGVTLDDISFLSSNDIASMQILKDASSAAIYGSRAANGVVLITTKNGAAGKARISLNAYTGLTSLTNKVAVLNTTQYRELLSDMGSTTALPDNLTDQTDWYKETFQTAMTQNYQLSVSNATDKLNYYVSAGYTGEEGIIKVAYFDRFNFRSNIENQIRPWLKIGANISYSDYTSNGIISGQGANRAGVVLSVLNTPTYAPVMDPNNPTQYNTNFYGVNITSPVENMARSEDNKSRNNRLISTGSAEITFLPNLKLRSTVTLDRFYNHSTSFLDPQKTSYGRSMRGVATDNRSLTSVMIYDNILSYNKAFGDHSIDLMGGTSGTTSYSTTSYQTVTHFENGAIKTLNAGNKVSQGNGTFDAHNAMMSYVGRIAYNYMSKYLLTANMRIDGSSKLHPDYRWGYFPSFSGAWRISSEEFMSDLTWIDDLKIRGGWGQTGNTAGLGDHDYLEHSSITRVNWWETGKGNAMPIITQSSLRNIQLSWENTTQTNIGIDFTLLKNRLSLNVDYYFKRTTDMLMNVTLPSESAVAPSIKRNEGEMTNSGFEFAVNSRNLQGALSWNTDFNISFNRNKLVRLDLTQIYYDAMTSDVIKEYIVRNEPGRPLGGFYGYFTDGVDPETGEFIYRDVNKDGQLTSSDRTFIGDPNPDFVYGMTNTFTYKGLNLSIFLQGSQGNDIFNASRIETEGMYDGKNQSIRVVDRWRRPGMVTSIPKAGYDLRVSDFFVEDGSYLRVKDITLSYDLAKTVLKSSGITRLQPYFTASNLFTITRYLGFDPEVNQWGNSGTVQGIDWGTYPQTRSFIVGVNIEF*