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scnpilot_p_inoc_scaffold_310_21

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(22512..23504)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 330.0
  • Bit_score: 572
  • Evalue 7.60e-161
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 330.0
  • Bit_score: 572
  • Evalue 3.80e-160
DNA-directed RNA polymerase subunit alpha n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7C2_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 330.0
  • Bit_score: 572
  • Evalue 2.70e-160
  • rbh

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 993
ATGGCAATATTAGCATTTCAAAAACCCGAAAAGGTTATCATGTTGGAAGCGGACAATTTTCATGGAAAATTCGAGTTCCGCCCGCTGGAGCCAGGTTACGGTATTACAATAGGTAATGCTTTGCGCCGCATTCTTCTGTCGTCATTAGAAGGTTTCGCAATCACTGCAATCAAAATTGAAGGCATTGATCATGAGTACTCTACAATTCCGGGTGTAATCGATGATGTTACCAATATCATTCTTAATCTGAAACAGGTTCGTTTTAAACAAGTTGTTGAAGATGTGGAGACCGAGAAGGTGACCATCAACGTAAACGGCACTACGATGCTGAAGGCTGGTGATATTGGTAAATATTTCACAGGCTTCGAAGTATTAAATGCCAATCATATCGTTTGCGAAATGGATGCTTCGGCCTCTTTTCAGATCGATATTACGGTAAGTAAAGGTCGTGGTTATCAGCCAGCAGAAGAAAACAAATCGCTTACCGGCGAGTTGGGCGTTATACCTGTCGACGCTATTTTCACTCCTATCCGTAATGTGAAATATAGCGTGGAGGACTACCGTGTCGAACAGGTGACCAACTACGATAAGTTAATTCTCGAAATCGACACCGATGGCTCTATTCATCCCAAGGATGCCTTGAAAGAAGCAGCGAAAATTCTGATTCATCATTTCATGCTGTTCTCGGATGAGAAGATATCGCTGGAAGTGGTTGAAACGGAGACTACCGACGAGTTTGATGAGGAATTCATCCGGATGCGTCAGCTGTTGAAAACGAAGCTCACCGATCTGGACCTGTCGGTTCGTGCACTCAATTGCCTTAAAGCTGCCGATGTGGAAACACTGGGCCAGCTTGCAGGTTACCACCGTCACGATTTGTTAAAGTTCCGCAACTTCGGTAAGAAATCGCTTACCGAGTTAGACGAAAAACTGGATAGCTTGAACCTGTCTTTCGGAATGGACATTGCCAAGTATAAATTAGATAAAGACTAA
PROTEIN sequence
Length: 331
MAILAFQKPEKVIMLEADNFHGKFEFRPLEPGYGITIGNALRRILLSSLEGFAITAIKIEGIDHEYSTIPGVIDDVTNIILNLKQVRFKQVVEDVETEKVTINVNGTTMLKAGDIGKYFTGFEVLNANHIVCEMDASASFQIDITVSKGRGYQPAEENKSLTGELGVIPVDAIFTPIRNVKYSVEDYRVEQVTNYDKLILEIDTDGSIHPKDALKEAAKILIHHFMLFSDEKISLEVVETETTDEFDEEFIRMRQLLKTKLTDLDLSVRALNCLKAADVETLGQLAGYHRHDLLKFRNFGKKSLTELDEKLDSLNLSFGMDIAKYKLDKD*