ggKbase home page

scnpilot_p_inoc_scaffold_56_1

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 1..1899

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate binding family 6 n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GDL6_METPE similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 359.0
  • Bit_score: 235
  • Evalue 1.90e-58
Cell surface protein {ECO:0000313|EMBL:AKB80284.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horo similarity UNIPROT
DB: UniProtKB
  • Identity: 33.1
  • Coverage: 652.0
  • Bit_score: 274
  • Evalue 5.30e-70
cell surface protein similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 555.0
  • Bit_score: 249
  • Evalue 2.10e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina horonobensis → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1899
TTCGGCCAGAATGAAGGCGGCTACGGCGACGGCTTCTCGACGGCCAAGACGGGCGGCAACTACATCTTCATTCGCCCGCAGATCTACAAGAACACGCAGGACGGCATCGACCTGCTGTACGCCGATGGCACCGGCAGCGTGACGGTGGACAGCGGCAATTTCGCCGATGACGCGGGCAATGACCTCAAGATCAGTGGCAGCGGCACGGTCACCAACAGCGTATTCGTCGCGAATTGCACGTGGTTCGGAGACAACGGCTATCCCGCCAAGGGTGACGATTGCCGCGCCGGCGGTGGCCTGTTGGGGGCCTTCAATGGCCCCAACCAGGTGCAGACGTGGGCCTACAACACCATGGTCGGCAACCCGAGCGGGATGTTCGTGGGGGATTCGACCAATGCGCAATCGAGCGACACCTACTATCTCTACAACAACATCTTCATCGCCGTGAACAAGAACGGCCAGCAGCCGTTCTTCACGTGGTTCGCGGATGGGTCCTACCCGGAAAAAGTGGTGTATGCCGGCAATCTGGTCTGGAACACCCGCAGCACGTCCTGCGACACCACCAGGATCATCTGCAAGGATCCGCAGCTCACGGACGAGTCGATGACATCGTTCAATCCCTACCCGCTGGTGAGCAGTCCGGCGATCGGCAATGCGGCGTCTGTCGGTACGCCCGTTGCGTATGACAACAACGGTAACCCGCGTCCGAGCCAGGGCGCCACCATCGGCGCGCTGGAATACCAGGGCGGTTCGTCGGGCACAGCCGGGGCGCCGAGCGCGAATTTTACCTACAGCGCTTCGGGGCTTGCGGTGAATTTCACCGATACCTCCACCGACACCGGCGGTACCATCGGTTCGTGGGCTTGGTCGTTCGGTGACGGCACAAGTTCGTCGGCGCAAAGTCCGAGCCATGCCTATGCCGCGGCGGGCACCTACCAGGTCGGGTTGACCGTGACCGACAAGGTCAGCGGCAAGACCTCGACGCGCACCGCACAAGTCGTGGTGGCGGCGCCGCAACCCGTTGGCGGTACGCCTTCGGCGAATTTCACCTACAGCACTTCCGGATTGACCGCGAGTTTCATTGACGCATCCACCGACAACGGCGGCAGCATTGGCTCGTGGGCGTGGTCGTTTGGTGACGGCACAAGTTCGTCGGCGCAGAGCCCGAGCCATGCCTACGCCGCGGCCGGCACCTATCAGGTCGGGTTGACCGTGACCGACAAGGTCAGTGGCAAGACCTCGACGCGCACCGCACAAGTCGTGGTGGCGGCGCCGCAACCGGTTGGCGGTACGCCTTCGGCGAATTTCACCTACAGCACTTCCGGATTGACTGCGAGTTTCATTGACGCATCCACCGACAACGGCGGCAGTATTGGTTCGTGGGCGTGGTCGTTCGGTGACGGCACAAGTTCGTCGGCGCAGAGCCCGAGCCATGCCTATGCCGCGGCGGGCACCTATCAGGTTGGTCTGACCGTGACCGACAAGGTCAGTGGCAAGACCTCGACGCGCACCGCGCAGGTGACGGTGACGGCGCCGCAACTGGGCGGTGGCACACCCAAGGCTGGTTTCACCTACAGCGTGTCAGGGATGACGGGCAATTTCACGGACAGGTCCACCGACAAGGGCGGCACCATCGATGCCTGGTCATGGTCGTTTGGTGACGGCACCAAGTCATCCGCCAGAAATCCGAGTCATGTCTACCGTAGCGCGGGTCATTACACGGTTACCCAGACGGTGCGGGACAAGGCCAGCGGGAAGACCTCCAGCATCAGTCGGGTCGTGCGTATCGCCAAACCCAGGGCCAGCGGGAAGACCTCCAGCATCAGTCGGGCCGTGCGTTTCGCCGAAACCAGGCTGTGTTTCTCCAGAGCCTGCTATTTGGAAAGGTCCAGGTGGTGA
PROTEIN sequence
Length: 633
FGQNEGGYGDGFSTAKTGGNYIFIRPQIYKNTQDGIDLLYADGTGSVTVDSGNFADDAGNDLKISGSGTVTNSVFVANCTWFGDNGYPAKGDDCRAGGGLLGAFNGPNQVQTWAYNTMVGNPSGMFVGDSTNAQSSDTYYLYNNIFIAVNKNGQQPFFTWFADGSYPEKVVYAGNLVWNTRSTSCDTTRIICKDPQLTDESMTSFNPYPLVSSPAIGNAASVGTPVAYDNNGNPRPSQGATIGALEYQGGSSGTAGAPSANFTYSASGLAVNFTDTSTDTGGTIGSWAWSFGDGTSSSAQSPSHAYAAAGTYQVGLTVTDKVSGKTSTRTAQVVVAAPQPVGGTPSANFTYSTSGLTASFIDASTDNGGSIGSWAWSFGDGTSSSAQSPSHAYAAAGTYQVGLTVTDKVSGKTSTRTAQVVVAAPQPVGGTPSANFTYSTSGLTASFIDASTDNGGSIGSWAWSFGDGTSSSAQSPSHAYAAAGTYQVGLTVTDKVSGKTSTRTAQVTVTAPQLGGGTPKAGFTYSVSGMTGNFTDRSTDKGGTIDAWSWSFGDGTKSSARNPSHVYRSAGHYTVTQTVRDKASGKTSSISRVVRIAKPRASGKTSSISRAVRFAETRLCFSRACYLERSRW*