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scnpilot_p_inoc_scaffold_58_19

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(24869..26191)

Top 3 Functional Annotations

Value Algorithm Source
amino acid permease Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 425.0
  • Bit_score: 438
  • Evalue 1.10e-119
putative amino acid permease; K03759 arginine:agmatine antiporter id=12557355 bin=CNBR_ACIDO species=Pseudomonas alcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 426.0
  • Bit_score: 426
  • Evalue 2.40e-116
  • rbh
amino acid permease-associated protein similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 446.0
  • Bit_score: 396
  • Evalue 1.30e-107

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
ATGCAAGTGTCGAAACGCCAGATCGGCCTCGTCACCGCGACCGCGCTGGTGCTGGGCAACATGATCGGCTCGGGGGTGTTCCTGCTGCCCGCCTCGCTGGCGCCTTACGGCGGCTACAGCCTGGTCGGCTGGGCCATCAGCGCGATCGGCGCCTTGCTGATGGCCAGCGTGTTCTACCGGCTCGCGCAACGCGCGCCGCGCGCGGGCGGTCCCTATGCCTACAGCCGCGAAGCGTTCGGCGACTGCGTCGGGTTCCTGGTGGGGTGGTGTTACTGGGTTTCGATCGTCGGCGCCAACGCAGCCATTGCCGTGGCCTTTGCCAGTTACCTGTCTACGTACATCCCGCTCATCGGATCGTCTCCGCTGCTCGGCGCGCTGACCGCGCTGGCGGCGATCTGGACGCTGACCGCCGTCAACATCGCCGGAATCCGCAATGCCGGCGTCGTGCAGGTGACGACGACGATCCTGAAGGTATTGCCGTTGCTGGTGCTGGCCGTGTTCGGCCTCGCGCACTTCAATCCGCAATTGCTGGTGCCCGGCCCCCAATCGGGTCCGCCGATGCACGCCATCAGCCTGTGCGTCACCGCAACGCTGTTCGCCTTCCTCGGCGTGGAGTGCGCGACGATCCCGGCCAACCACGTGCGCGATCCCGAGAAAACCATCCCGCGCGCCACGCTGCTCGGGGCCTTGATCGCGGCATTGGTTTACATCGCCTGCACCGCAGCGGTACTGGGCCTGATCCCGGCCGCGCAACTCGCGCATTCGAACGCGCCGTTCGCGGATGCCGGCCGCCTGTTGTGGGGCGACTGGGCCGCATGGTTGATCGCCGGCGTCGCGGCGATTTCCTGCTTCGGCGCGCTGAACGGCTGGATCATGATCGCCGGGCAATATCCCCACGCGATAGCGCGTGACGGACTGCTGCCACGTTTCTTCGCGGGCGAATGCCGGCGCGGCACGCCAGCCCAGGCGCTGTTGTTCGCGGCGGCCTTCAGCAGCCTGCTGGTGCTGGCGAATTACACCCGTGGCCTGGTGGCAATGTTCACCTTCATCGTGTTGTTGTCGACCCTGGGTTGCGTGATCGCCTACCTGTTCTGTGCGATGGCCGACATCGTGCTCGCCCGCCGCGCCGCGAGCCCGGCGCCATGGCGCAACCTCGTCCTGGCGTGCGGCGGGTTCGCGTTTTCGGTGCTGGCAGTGATCGGCGCCGGCCAGGAAGCGGTGTACTGGAACTTCATCCTGCTGATCACCGGCATTCCGCTGTATGTGTGGCTGGCGCGGAGCGGAAAGAACGCGGCCACACCAGAACCTGGTGCGCCGCGTTAA
PROTEIN sequence
Length: 441
MQVSKRQIGLVTATALVLGNMIGSGVFLLPASLAPYGGYSLVGWAISAIGALLMASVFYRLAQRAPRAGGPYAYSREAFGDCVGFLVGWCYWVSIVGANAAIAVAFASYLSTYIPLIGSSPLLGALTALAAIWTLTAVNIAGIRNAGVVQVTTTILKVLPLLVLAVFGLAHFNPQLLVPGPQSGPPMHAISLCVTATLFAFLGVECATIPANHVRDPEKTIPRATLLGALIAALVYIACTAAVLGLIPAAQLAHSNAPFADAGRLLWGDWAAWLIAGVAAISCFGALNGWIMIAGQYPHAIARDGLLPRFFAGECRRGTPAQALLFAAAFSSLLVLANYTRGLVAMFTFIVLLSTLGCVIAYLFCAMADIVLARRAASPAPWRNLVLACGGFAFSVLAVIGAGQEAVYWNFILLITGIPLYVWLARSGKNAATPEPGAPR*