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scnpilot_p_inoc_scaffold_989_22

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(24408..25175)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide core biosynthesis glycosyltransferase n=2 Tax=mine drainage metagenome RepID=T1ATK6_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 253.0
  • Bit_score: 388
  • Evalue 7.20e-105
  • rbh
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:GAN45021.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 251.0
  • Bit_score: 398
  • Evalue 5.70e-108
lipopolysaccharide core biosynthesis glycosyl transferase similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 252.0
  • Bit_score: 360
  • Evalue 4.60e-97

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Taxonomy

Mizugakiibacter sediminis → Mizugakiibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGTCCGAACGCCCCCGCATCTCGGCTTGCGTCATCACCCTGAACGAAGCCGACCGCATCGGCGCCTGCCTCGCCTCGCTGGCGTTCTGCGATGAACTGGTGGTGGTCGATTCGGGCTCGACCGATGACACCCGCGCGGCTGCGACGGCGCGCGGCGCGCGGGTCATCGAACATGCCTTCGAGGGCTTCCGCACGCAAAAGGATTTCGCGGTGGCGCAGGCGCGGCACGACTGGGTGTTGTGCCTGGATGCCGACGAGCGCGTGACGCCGGCGCTGCGCGCCTCGATCGAAGCCGCGCGCGACGCCGGTTTCGCCGGTGCCGCCGGTTATCGCTTCGCGCGTTGCACCGAGTACTTCGGCGCCTTCCTGCGCCACGGCAACGCCTATCCCGATCGCGTGTTGCGGTTGTTCGATCGGCGCCGCGGCGGTTGGCGCGCGGGCCGCGAGATCCACGAACACGCCGTGGTCGAGGGCAACGTGGCGATGCTCGCGGGCGACCTGGAACATCGCGCCTACCGTTCGCTGGACGACCAGCTCGCCCGCTATCGCCGCTATGCGGCGATGATGGCGGTCGACATGCATGCGCGCGGCCGGCGCGGGCGCCTGCGCAACCTGGTGGTGAATCCCGCGTGGCGATTCCTGCGCGGCTATGTGCTGCGCGCGGGCTTCCGGGACGGCTGGCGCGGCTTCCTGTTCGCCTGCATGGAAGCCGACTATGTGCGCGAGAAATTCGCGCGGCTGTGGTTGCTGCAGCATGGCGGCCGGTGA
PROTEIN sequence
Length: 256
MSERPRISACVITLNEADRIGACLASLAFCDELVVVDSGSTDDTRAAATARGARVIEHAFEGFRTQKDFAVAQARHDWVLCLDADERVTPALRASIEAARDAGFAGAAGYRFARCTEYFGAFLRHGNAYPDRVLRLFDRRRGGWRAGREIHEHAVVEGNVAMLAGDLEHRAYRSLDDQLARYRRYAAMMAVDMHARGRRGRLRNLVVNPAWRFLRGYVLRAGFRDGWRGFLFACMEADYVREKFARLWLLQHGGR*