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scnpilot_p_inoc_scaffold_4_60

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(76779..77234)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000380A6AD similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 155.0
  • Bit_score: 230
  • Evalue 1.10e-57
Transcriptional regulator {ECO:0000313|EMBL:KER35756.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium l similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 154.0
  • Bit_score: 233
  • Evalue 1.40e-58
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 148.0
  • Bit_score: 202
  • Evalue 9.40e-50

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Taxonomy

Sphingobium lucknowense → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGAACATTGGCGAGGCGGCAAAGGCATCGGGCGTTTCGGCCAAGATGATCCGCTATTACGAAACCACCGGTTTGATCCCCAAGGCCGAGCGGCGGGATTCAGGATACCGCGATTATTCGCCCGCCGATGTGCACAATCTGCGCTTTATCCGCCGCGCGCGCGACATGGGCTTTGCCGTGGCCGAGATTCAGGAACTGCTGGGCCTGTGGCGGGACCGTTCGCGCCACAGCGCGGATGTCAAACGCATCGCTTCGGCCCATGTCGAGCAATTGAGCGCCCGCATCGCCGCGATGGAGGAAATGCGCAGCACGCTCCAGACGCTGATCGGATGCTGCGCCGGGGACGACCGGCCCGATTGCCCGATTCTGGCCGATCTGGAGGAGCCGGGGCTTGCGGTTCGCCCCGATGCGCAGGCCCGGCTGCGCGAGCGGTCAATTGCGAACCGGCGCGGATAG
PROTEIN sequence
Length: 152
MNIGEAAKASGVSAKMIRYYETTGLIPKAERRDSGYRDYSPADVHNLRFIRRARDMGFAVAEIQELLGLWRDRSRHSADVKRIASAHVEQLSARIAAMEEMRSTLQTLIGCCAGDDRPDCPILADLEEPGLAVRPDAQARLRERSIANRRG*