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scnpilot_p_inoc_scaffold_4_77

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 95439..97844

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent Clp protease ATP-binding subunit ClpA n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IFD4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 795.0
  • Bit_score: 1367
  • Evalue 0.0
ATP-dependent Clp protease ATP-binding subunit clpA {ECO:0000313|EMBL:GAO54290.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphing similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 797.0
  • Bit_score: 1374
  • Evalue 0.0
ATP-dependent Clp protease ATP-binding subunit ClpA similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 795.0
  • Bit_score: 1367
  • Evalue 0.0

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2406
ATGCCCAGTTTCGCCCAAAGTCTCGAAAAGACCCTCCACGCGGCACTCAGCCAGGCGTCGGAGCGCAGCCATGAATATGCAACGCTGGAGCATCTCCTGCTGGCGTTGATCGACGATCCCGATGCGTCGCAGGTGATGATCGCCTGCGGTGTGGATCTGGGCGATCTGGCCGAGGCGGTGAAGCAATATCTGGATCAGGAATACCAGAGCCTGAAAACCAAGGAAAAGGGTGATCCGGCCCCGACCGCCGGTTTCCAGCGCGTGATCCAGCGCGCCATCCTGCATGTTCAATCCAGCGGCAAGGATACGGTCACCGGCGCCAATGTGCTGGTCGCGCTGTTTTCCGAACGCGATTCCTATGCGGTCTATTTCCTGCAGCAGCAGGACATGAGCCGTCTGGATGCCGTCAGCTTTATCAGCCACGGCATCGGCAAGGGCGGCAAGAAGATCGAGGACAAGAGCCCCAAGGGCGCCGAGGCCGAAGAACCGCGTCAGGAAGAAAAGCAGGAAACCAAGTCGGCGGGCAGCGCCAACAAGAAGGATTCCGCGCTCGACCAGTTCTGCGTCAACCTCAATGAAAAGGCGCTGGGCGGCAAGGTCGATCCGCTGATCGGGCGCGGGCCCGAGGTGGACCGCACGATCCAGATCCTGTGCCGCCGGTCGAAGAACAACCCGCTTTATGTGGGCGACCCCGGCGTGGGCAAAACCGCGATTGCCGAGGGTCTTGCGCGCAAGATCGTCGAGGGCGAAGTGCCCGAAGTGCTGGCCAATGCGGTGATCTATTCGCTCGATATGGGTTCGCTGCTGGCGGGCACGCGCTATCGCGGCGATTTTGAAGAGCGGTTGAAGCAGGTCGTTTCGGAACTCGAAAAGATGCCGCACGCGATCCTCTTCATCGACGAGATCCACACCGTCATCGGCGCCGGCGCCACCAGCGGCGGGGCGATGGATGCGTCCAACCTCCTGAAGCCCGCGCTCTCGGGCGGCTCGATCCGCTGCATCGGCTCGACCACCTATAAGGAGTTCCGCAATCACTTCGAAAAGGACCGCGCCCTGCTGCGCCGGTTCCAGAAGATCGATGTGAACGAACCGAGCATCGAGGACACGATCAAGATCCTGAAAGGTCTGCGCACCGCGTTTGAAGATCACCATAAGGTGAAATACACGCCGGGCGCGATCAAGTCGGCGGTGGAACTGTCCGCGCGCTACATCAACGACCGCAAGCTGCCCGACAAGGCGATCGACGTGATCGACGAAGTGGGCGCGATGCAGATGCTGGTGCCGCCCTCCAAGCGCAAGAAGACCATCACCGAGCGCGAGATCGAGGCCGTGATCGCCACGATGGCGCGCATCCCTCCCAAGTCGGTCAGCAAGGACGACCGCGCGGTGCTGGGCCATCTGGAACGCGATCTCAAGCGCCAGGTGTTTGGTCAGGACAAGGCCATCGAAGTGCTCTCCTCGGCCATGAAGCTGAGCCGGGCGGGCCTGCGCGATCCGGACAAGCCGATCGGCTGTTTCCTGTTCTCCGGCCCCACGGGCGTCGGCAAGACCGAGGTGGCCAAGCGTCTGTCGGAAATCATGGGCATCCCGCTCCAGCGTTTCGACATGTCGGAATATATGGAGCGCCATTCGGTCTCGCGCCTGATCGGTGCCCCTCCGGGCTATGTCGGCTTTGATCAGGGCGGTCTGCTCACCGATGCCATTGACCAGCAACCGCATTGCGTGCTGCTGCTCGACGAAATCGAAAAAGCCCATCCGGATCTGTTCAACATCCTGCTTCAGGTGATGGACAATGGCCGCCTGACCGATCACCACGGAAAGACGGTCGATTTCCGTAACGTGATCCTGATCATGACCACCAATGCGGGCGCGTCCGACATGGCGCGCAGCGGTATCGGCTTTGGCGACATCTCCAAGGCGGATGCGGGCGAGGAAGCGGTGCGCAACCTCTTCACCCCCGAATTCCGCAACCGTCTGGATGCTATCGTGCCCTTTGCCTATCTGGGCAAGGAAGTGGTCAGCCGCGTGGTGGACAAGTTCATCCTCCAGCTCGAACTGCAGCTGGCCGATCAGAACGTGCATATCCAGTTCGATGCGGCAGCGCGCGAATGGCTGGGTGATCGCGGCTATGACCGGCTCTATGGCGCGCGGCCGATGTCGCGCCTCATTCAGGACAAGGTCAAGCAACCGCTGGCCGAGGAACTGTTGTTCGGCAAGCTGGCCCATGGCGGCGAGGTCAATGTCACGGTCAAGGAAGGCGAGGATGGCAGGAGCGAGCTGACCTTCCTGCTCGTGCCGGCCGCGCCCAAGCTGGACGCGAAAAAGACGCCCAAGGGCAAGAAGAAGTCCAGCGCCGCATCCGAGCCGTCCGAAAACGGCGGCGAGAATGAGGGCGAGAGCGAATAA
PROTEIN sequence
Length: 802
MPSFAQSLEKTLHAALSQASERSHEYATLEHLLLALIDDPDASQVMIACGVDLGDLAEAVKQYLDQEYQSLKTKEKGDPAPTAGFQRVIQRAILHVQSSGKDTVTGANVLVALFSERDSYAVYFLQQQDMSRLDAVSFISHGIGKGGKKIEDKSPKGAEAEEPRQEEKQETKSAGSANKKDSALDQFCVNLNEKALGGKVDPLIGRGPEVDRTIQILCRRSKNNPLYVGDPGVGKTAIAEGLARKIVEGEVPEVLANAVIYSLDMGSLLAGTRYRGDFEERLKQVVSELEKMPHAILFIDEIHTVIGAGATSGGAMDASNLLKPALSGGSIRCIGSTTYKEFRNHFEKDRALLRRFQKIDVNEPSIEDTIKILKGLRTAFEDHHKVKYTPGAIKSAVELSARYINDRKLPDKAIDVIDEVGAMQMLVPPSKRKKTITEREIEAVIATMARIPPKSVSKDDRAVLGHLERDLKRQVFGQDKAIEVLSSAMKLSRAGLRDPDKPIGCFLFSGPTGVGKTEVAKRLSEIMGIPLQRFDMSEYMERHSVSRLIGAPPGYVGFDQGGLLTDAIDQQPHCVLLLDEIEKAHPDLFNILLQVMDNGRLTDHHGKTVDFRNVILIMTTNAGASDMARSGIGFGDISKADAGEEAVRNLFTPEFRNRLDAIVPFAYLGKEVVSRVVDKFILQLELQLADQNVHIQFDAAAREWLGDRGYDRLYGARPMSRLIQDKVKQPLAEELLFGKLAHGGEVNVTVKEGEDGRSELTFLLVPAAPKLDAKKTPKGKKKSSAASEPSENGGENEGESE*