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scnpilot_p_inoc_scaffold_4_88

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 106741..107274

Top 3 Functional Annotations

Value Algorithm Source
CarD family transcriptional regulator n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0ILE4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 177.0
  • Bit_score: 322
  • Evalue 2.60e-85
  • rbh
CarD family transcriptional regulator {ECO:0000313|EMBL:EQB12600.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 177.0
  • Bit_score: 322
  • Evalue 3.60e-85
carD family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 174.0
  • Bit_score: 321
  • Evalue 1.20e-85

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Taxonomy

Novosphingobium lindaniclasticum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGACCGCCAAGGCGCACGCCTTCGATGTCGGAGATTACGTCGTATACCCCAAGCACGGCGTTGGCCGGGTGATCGAACTGCTTGAGCAGGAGATCGCGGGGATGAAGCTTGAACTGTATGTGTTGCGGTTTGAAAAAGAACGCATGACGCTGCGCGTTCCGGTTAACAAGGTCGAAGCCATCGGCATGCGCAAGCTGTCCTCGGACAAGACCCTGCGCGAGGCGATGGACACGCTCAAGGGCAAGCCCAAGGTCAAGCGCACCATGTGGTCGCGCCGCGCCCAGGAATATGAAGCGAAGATCAATTCGGGTGATCTGGTTTCGATCGCCGAAGTGACCCGCGACCTGTTCCGCGCCGACGATCAGCCCGAGCAGTCCTATTCGGAACGCCAGATCTTTGAAGCCGCCTCCAGCCGCCTCGCGCGCGAACTGGCCGCGATGGAAAAGACCGACGAACCGGCTGCTCTGAAGAAGATCCTCGCGATCCTTAATGAGTATGCGCCCAAATATTACGAGGCCGCCGCCGCCGTCTGA
PROTEIN sequence
Length: 178
MTAKAHAFDVGDYVVYPKHGVGRVIELLEQEIAGMKLELYVLRFEKERMTLRVPVNKVEAIGMRKLSSDKTLREAMDTLKGKPKVKRTMWSRRAQEYEAKINSGDLVSIAEVTRDLFRADDQPEQSYSERQIFEAASSRLARELAAMEKTDEPAALKKILAILNEYAPKYYEAAAAV*