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scnpilot_p_inoc_scaffold_4_234

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(255390..257165)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3AF29_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 576.0
  • Bit_score: 577
  • Evalue 1.50e-161
  • rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJL30941.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 576.0
  • Bit_score: 577
  • Evalue 2.10e-161
putative diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 588.0
  • Bit_score: 352
  • Evalue 2.20e-94

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Taxonomy

Novosphingobium sp. AP12 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1776
ATGAGTGCTCGAGTCCGCGCCTTGCTCCTGCAATATTTCGGGCAAAGCCTGTTGCTGTGCCCGATCTATTTCGCCAGCGCGCTGCTCGCCCTGCAGCTGACGCGCTTCAATGGCGGGGTGGCGATTGTCTGGCCGGCGGGCGCGGTGCTGTTCTCGGCATTGGCGGCGATGCCGCATCGGCGCTGGGCCATGGCGCTGCTGCTGTGCTTTCCGGCGGGGGCTCTGGCGATTGCGCTGCGCGGGTTTGGCGGGGCCTATACGCTGCCGCTGACGCTGGCGGGATTGTTCGAGGCATGGCTGGCCGCCAGTCTGCTGCGCCATCTTTCTCCGCGTTTTACCCGGTTTGAATCGATCCGCGATGTGGTCAGTTTCCTGCTGGTCGCCGGGGTGATTGCGCCTGCCGCCTCAGCCTTTATCGGCGCATGGGCGGCCCATGGGGCCACGGGCATCCCCTTTTTCAACGCATGGCGCGACTGGTTCGGCGCCCATGCGCTCAGCCTCGTCACCTTTGCCCCGCCGATCTTTCTGGTGCTGCGCCGCCGCCGTCTGGATGCGGCCAAATTCCGCCGCGAACGCCTGGGCGAAGCGCTGGTACTGATGGGCGCGGTATCGCTGGCCACGCTGGCCACGTTTGGGCAAAACCGGATTCCGCTGGTCGTCGTGCCGCTGGTGCCGATGGTGGCGGCCACGTTCCGGCTGGGGCGGATCGGGGCGGTGGCCTCGCTGCTGGTCCTGATCTGCGGCGGGTTGATCGGCACGATGACGGGCCATGGGCCCACGATGCTGCTGCATCTCGATATGCCGACCAAGCTGCTGGTGCTGCAGATCTATTTTGCCTGCGTGGTGCTGATCCTGCTGCCGGTGGCGGCCGAGCTGGAATCGCGCCGCCGCCTGATGCAGAACCTGCGCGATGCCGAAGCCCTGCACCGACTGATCGTCGAGCGGACCGGCGATGTCATCATGCGGGTCAATCTGGATGGCACCTTGCGCTCGGTATCGGAGGAAGGAGCCCGGCTATGGGGCTATCAGGCCGAGGAACTGGTGGGCCGCTCGGCCTATGATCTGGTCCATCCCGAGGACGAGCAGGCCGTGTTCGACGCCCGCTTTCAAGCGCTGTGCGAGCCGGAGGGCACCGTGGCGGTCGAATGCCGGGTCATGCGCAAGGATGGCGGATCAACCTGGGTGGAAAGCCATATGTGCGCTACGCTGGACCCGCGCGGGGTGCCCAACGGCACGGTGTCGATCATCCGCGACAATTCAGCGCGGCGGCGGCTGATCGAAAATCTGGCGCATGAGGCCAATACCGATCCGTTGACCGGGCTTGGCAACCGGCGCGCCTTTGACCGCGCCATGGCCCGCGACAGAAAGGCGGGCGGAAGCGGTTGTCTGGCCCTGTTCGACCTGGATCATTTCAAGCGGATCAATGACGTCTATGGCCATGCCACGGGCGACCGCATCCTGACGATGTTTGCCACCTTGCTGTGCGGGACAGTGCGCGCGGGCGATGTGGTGGCGCGGCTGGGGGGCGAGGAATTCGGCGTGCTGCTGCGTGATGTCTCGCTGGAGCAGGCAGGGCTGATCTGCGAAAGGGTGCGCACCCGTCTGGCCGAGAGCGAGGGGCGCTCGATTCTGGGCGAAGTGGTGCGGGTGACGGTCAGCGTCGGCCTGACCCCGCTGAACGCCGACATGCCGCCCGAGGAGGCTTTTCGTCAGGCCGATGCCGCGCTCTATCGCGCCAAAGGGGCGGGGCGCAACCAGATGGCCATCGCGGCCTAA
PROTEIN sequence
Length: 592
MSARVRALLLQYFGQSLLLCPIYFASALLALQLTRFNGGVAIVWPAGAVLFSALAAMPHRRWAMALLLCFPAGALAIALRGFGGAYTLPLTLAGLFEAWLAASLLRHLSPRFTRFESIRDVVSFLLVAGVIAPAASAFIGAWAAHGATGIPFFNAWRDWFGAHALSLVTFAPPIFLVLRRRRLDAAKFRRERLGEALVLMGAVSLATLATFGQNRIPLVVVPLVPMVAATFRLGRIGAVASLLVLICGGLIGTMTGHGPTMLLHLDMPTKLLVLQIYFACVVLILLPVAAELESRRRLMQNLRDAEALHRLIVERTGDVIMRVNLDGTLRSVSEEGARLWGYQAEELVGRSAYDLVHPEDEQAVFDARFQALCEPEGTVAVECRVMRKDGGSTWVESHMCATLDPRGVPNGTVSIIRDNSARRRLIENLAHEANTDPLTGLGNRRAFDRAMARDRKAGGSGCLALFDLDHFKRINDVYGHATGDRILTMFATLLCGTVRAGDVVARLGGEEFGVLLRDVSLEQAGLICERVRTRLAESEGRSILGEVVRVTVSVGLTPLNADMPPEEAFRQADAALYRAKGAGRNQMAIAA*