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scnpilot_p_inoc_scaffold_4_238

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(259971..260450)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G352_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 159.0
  • Bit_score: 293
  • Evalue 1.50e-76
rplM; 50S ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 159.0
  • Bit_score: 293
  • Evalue 4.30e-77
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; No similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 159.0
  • Bit_score: 293
  • Evalue 2.10e-76

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Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGAAGGCTCTCACCAAGGTCACCCGGTCGGTCAAGCCGGCTGAGGTGGAAAAGAAGTGGCATCTGATCGATGCCGAAGGTCTGGTGCTCGGCCGTCTTGCCGTCATCATCGCCAACACGCTGCGCGGCAAGCACAAGCCCACCTTTACGCCCCACGTTGACACCGGCGATCACGTCGTCGTCATCAACGCCGACAAGGTGCGTCTGACCGGCAACAAGCTGAAGAACAAGGTGTACTACAAGCACACCGGTTATGCCGGCGGCATCAAGGAAGTGACCGCTGCCAAGGTTCTGGAAGGCCGCTTCCCCGAGCGCGTGATCGAGAAGGCTGTGGAACGCATGATTCCGCGCGGTCCTCTGGGCCGTCAGCAGATGCGTGCCCTGCACCTCTACGCTGGTGCCGAGCACCCGCACGCCGGCACCCAGCCTCAGCCGCTGGACGTCGCTGCCCTGAACCGCAAGAACAAGGTTGGTGCGTAA
PROTEIN sequence
Length: 160
MKALTKVTRSVKPAEVEKKWHLIDAEGLVLGRLAVIIANTLRGKHKPTFTPHVDTGDHVVVINADKVRLTGNKLKNKVYYKHTGYAGGIKEVTAAKVLEGRFPERVIEKAVERMIPRGPLGRQQMRALHLYAGAEHPHAGTQPQPLDVAALNRKNKVGA*