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scnpilot_p_inoc_scaffold_4_264

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(285763..286704)

Top 3 Functional Annotations

Value Algorithm Source
group 2 family glycosyl transferase (EC:2.-.-.-) similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 304.0
  • Bit_score: 371
  • Evalue 3.20e-100
Lipopolysaccharide core biosynthesis glycosyl transferase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C8K5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 302.0
  • Bit_score: 393
  • Evalue 1.60e-106
Lipopolysaccharide core biosynthesis glycosyl transferase {ECO:0000313|EMBL:EIZ79785.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novos similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 302.0
  • Bit_score: 393
  • Evalue 2.30e-106

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Taxonomy

Novosphingobium sp. Rr 2-17 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGCCTTCCGCTTCCTCCACGCTGGACCTGACGGTTCTGATCCTGACCTATAACGAAGCGCGCCACATCGAGCGCTCGATCGCCAGCGTGAAGCATTTCGCCCGCGAGATTGTGGTGGTCGACAGCCATTCCACCGACAACACGGTCGAGCTGGCCGAAAAGGCCGGCGCGCGCGTACTGTTCAACCCGTTCATCAATTATTCCAAGCAGTTCCAGTGGGGCCTCGACAATGGCGGGATCACATCGGAATGGGTCATGCGGTTGGATGCCGATGAGATCATCGAGCCGGATCTGGGCGATGAACTGATACGGGCGGTCAAGGATGCACCTGCCGATGTGGTGGGCATGAACATGGACCGCAAGCATATCTTCATGGGCCGCTGGGTGCGCCATGGCGGGCGCTATCCGCTGCGTCTGCTGCGCGTCTGGCGGCGCAACAACGGGCGCATCGAAGACCGCTGGATGGACGAGCATATCGTCATCTGGGGCGGGCGCACCATCGACCTCAAGGGCGGGTTTGCCGACTGCAATCTCAATGACCTGACCTTCTTCACCGAGAAGCACAACAAGTACGCCACGCGCGAAGCGATCGACAAGCTGAGCCAGAAATATCGGCTGTTCGAAAAGGACGAGGCATTTTCCGATGATTCCGGCCCCCGCCAGGCCGTCATCAAGCGCTTTGTCAAGGAGCAGGTTTACAATCGGTTACCATTCTGGGCTGGACCCTTCGGTTATTTCCTCTATCGTTATTTCGTTCAACTTGGCTTTCTCGACGGCTATCAGGGGTTGATCTACCATTTCCTTCAGGGTTGCTGGTATCGCTTCCTGGTCGAGGCCAAGACCATAGAACTCGATGAAGCCATCCGCGATTGTCAGACCAATGATGAACGCGTGCAACGGCTTACCGCTTTGACAAAATTATCGCTTGGACCGACACGATGA
PROTEIN sequence
Length: 314
MPSASSTLDLTVLILTYNEARHIERSIASVKHFAREIVVVDSHSTDNTVELAEKAGARVLFNPFINYSKQFQWGLDNGGITSEWVMRLDADEIIEPDLGDELIRAVKDAPADVVGMNMDRKHIFMGRWVRHGGRYPLRLLRVWRRNNGRIEDRWMDEHIVIWGGRTIDLKGGFADCNLNDLTFFTEKHNKYATREAIDKLSQKYRLFEKDEAFSDDSGPRQAVIKRFVKEQVYNRLPFWAGPFGYFLYRYFVQLGFLDGYQGLIYHFLQGCWYRFLVEAKTIELDEAIRDCQTNDERVQRLTALTKLSLGPTR*