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scnpilot_p_inoc_scaffold_4_365

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(406432..407010)

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide export protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VPI2_CAUST similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 194.0
  • Bit_score: 175
  • Evalue 4.30e-41
polysaccharide export protein similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 194.0
  • Bit_score: 175
  • Evalue 1.20e-41
Polysaccharide export protein {ECO:0000313|EMBL:ADG12405.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 194.0
  • Bit_score: 175
  • Evalue 6.00e-41

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Taxonomy

Caulobacter segnis → Caulobacter → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGCGTAGAAACAGTAATCGTCCGCGCGCCAAAATCGCGATTGCTCTGGCCATTGGTACAAGTCTGCTCTGGCAGGCTCCGGCCCATGCAGAAACTTCGTTGCCACAATCCGCTTCTCTGCAGGATTACCACCTTGGCCCCAATGACCGGATTTCGCTTTCGGTCTATGGCGAAGACGAAATTTCGCGGGAATATGTGATCAGCCCGACCGGCATGATCTCGGTGCCCCTGATCGGCGAGGTCGAGGCCAAGGGCCTGACGGTCGAGCAGTTGCGCGGCGAAATTCAGCGGCGCCTTGCCGCAGGCTTTGTAAACAATCCGACGATCTCGCTCATGATCACCGGATATCGCAACTTCTATATCCTGGGTGAAGTGGGGCGGCCGGGTGAATATGCCTATACCGTCGGGCTGACCGTGACCCAGGCGGTGGCCGAGGCAGCGGGGTTCACCTATCGCGCGGCCAAGCGCTATGTCTATATCCGGCACGAGGGCGAGACCGAGGAAAAGAAGGTCCAGCTGTCGCCCGACATGAAGGTCCTGCCCGGTGACACCATCCGCTTTGGCGAGCGCTATTTTTGA
PROTEIN sequence
Length: 193
MRRNSNRPRAKIAIALAIGTSLLWQAPAHAETSLPQSASLQDYHLGPNDRISLSVYGEDEISREYVISPTGMISVPLIGEVEAKGLTVEQLRGEIQRRLAAGFVNNPTISLMITGYRNFYILGEVGRPGEYAYTVGLTVTQAVAEAAGFTYRAAKRYVYIRHEGETEEKKVQLSPDMKVLPGDTIRFGERYF*