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scnpilot_p_inoc_scaffold_4_422

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 477667..479604

Top 3 Functional Annotations

Value Algorithm Source
Squalene hopene cyclase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7H4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 644.0
  • Bit_score: 956
  • Evalue 9.80e-276
  • rbh
Squalene--hopene cyclase {ECO:0000313|EMBL:GAO40251.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 636.0
  • Bit_score: 972
  • Evalue 4.20e-280
squalene-hopene cyclase similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 645.0
  • Bit_score: 889
  • Evalue 4.20e-256

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Taxonomy

Sphingomonas changbaiensis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1938
ATGAGCCAAACCGCCCCTGATCGCGCCCTTCTGGACGCCACCATCGGCCGCGCCGCCCACGCCCTGCTGGCCGAGCAGCGCGAGGATGGCCATTGGGTTTATGAACTGGAGGCCGATGCCACCATTCCGTCCGAATATGTCCTGCTGCGTCATTTCCTTGGCGAGCCGGTGGATGAGGAGTTGGAAGGCAAGATCGGCCGCTATCTGCGCCGGATTCAGTCGGAGGCCCATGATGGCTGGCCGCTCTATCACGAGGGCGGGTTCGATATTTCGGCCACGGTGAAGGCCTATTACGCGCTGAAGATGATCGGCGATGATGTCGATGCGCCGCATATGGCCCGCGCCCGCGCCGCAATCCTGAAGGCGGGCGGGGCCGAGGCGGTCAATGTCTTTACCCGCATCCAACTGGCGTTGTTCGGCGCCGGGCCGTGGGATGCTGTGCCCACCATCCCGCCCGAGCTGATCCTCGCGCCGCGCTGGTTTCCGGTCCATCTGCTGAAGATGAGCTATTGGGCGCGCACGGTGGTGGTGCCGCTCTTGGTGCTATGTGCGTTGAAGCCCGTGGCGCGCAATCCGAAACAGGTGTTTGTGCCGGAGCTGTACACCGGCGTGCCGCGCAAGCTGACCAGCCAGGCCGACCATGTGCATCCGGTATGGAAGAACGGGTTCGAGGCGCTGGACTGGGGGCTGAAACGGTTTGAGGGACGCTGGCCCAAGGCGATGCGCGCCCGCGCCATCCGCCTGTGCGAGGAATGGGTGGTCGAGCGCCTCAACGGCGTTGATGGTCTTGGCGCGATCTATCCGGCCATGGCCAACAGCGTGATGATGTTCGACGTGCTGGGCTATGCGCCCGACCATCCGCATCGCGCCATTGCCCGCGAATCGGTCGAGCGGCTGTTGGTGGTCAAAGAGGACGAGGCCTATTGCCAGCCCTGCGTCAGCCCGGTCTGGGACACCGCTCTGGCCGCCCATGCCATGCTGGAGGTGGGCAGCGAGGAGGCGTTGGCCGGAGCCGACCGCGCGCTCGACTGGCTGGGGCCGCGCCAGATCCTTGATACGGCGGGCGATTGGGTCGAGCAGCGCTATGTCCGGCCCGGCGGCTGGGCGTTTCAGTATAATAACGATCACTATCCCGATCTGGACGACACCGCCGTGGTGGTGATGGCGATGGACCGCGCCTCGGGCCTGCGCGGCGACAAGGACAAGGAAGCCATCGCGCGCGGGTTTGAATGGACCGTGGGTCTGCAATCGAAGGATGGCGGGTTTGCCGCTTTCGATGCGGACAATGACAAGCTCTATCTGAACAACCTGCCCTTTGCCGATCATGGCGCTCTGCTCGACCCGCCCACAGCCGATGTTTCGGCCCGCGTGGTCTCGATGCTGGCGCAGATGGGCGAGCCCGTCGACAGCCCGCGCATGACAGCCGCGCTGGGCTGGCTGGAGAAAGAGCAGGAGAAGGAAGGCAGTTGGTTTGGCCGCTGGGGGGTCAACCATGTCTATGGAACCTGGTCGGTGCTGTGCGCCTTGGGCCGGGCAGGGATCGGGCGCGACCATCCGATGGTGGCGCGCGCGGTCGAATGGTTGAAATCGGTGCAGAATGCGGATGGCGGCTGGGGCGAAAGCTGCGATTCCTATGCGCTGGACCGCAAGGGCCATGAAACTTTCGATTCGAACGCCAGCCAGACCGCATGGGCCACGCTCGGCCTGATGGCGGTGGGCGAGGCAAAAAGCGAGGCAGTCGCGCGCGGGATCGCGTGGCTGATCGCCAATCAGGCCGGGGACGGTCTCTGGGGGCAGGAGCATTATACGGGCGGGGGTTTCCCGCGAGTCTTTTACCTGCGTTATCATGGCTATCCGCGCTATTTCCCGCTTTGGGCTCTGGCGCGGTATCGCAATATGGCGCAGGCCAATGTGGAGCAAGCCCAGTGGGGAATGTGA
PROTEIN sequence
Length: 646
MSQTAPDRALLDATIGRAAHALLAEQREDGHWVYELEADATIPSEYVLLRHFLGEPVDEELEGKIGRYLRRIQSEAHDGWPLYHEGGFDISATVKAYYALKMIGDDVDAPHMARARAAILKAGGAEAVNVFTRIQLALFGAGPWDAVPTIPPELILAPRWFPVHLLKMSYWARTVVVPLLVLCALKPVARNPKQVFVPELYTGVPRKLTSQADHVHPVWKNGFEALDWGLKRFEGRWPKAMRARAIRLCEEWVVERLNGVDGLGAIYPAMANSVMMFDVLGYAPDHPHRAIARESVERLLVVKEDEAYCQPCVSPVWDTALAAHAMLEVGSEEALAGADRALDWLGPRQILDTAGDWVEQRYVRPGGWAFQYNNDHYPDLDDTAVVVMAMDRASGLRGDKDKEAIARGFEWTVGLQSKDGGFAAFDADNDKLYLNNLPFADHGALLDPPTADVSARVVSMLAQMGEPVDSPRMTAALGWLEKEQEKEGSWFGRWGVNHVYGTWSVLCALGRAGIGRDHPMVARAVEWLKSVQNADGGWGESCDSYALDRKGHETFDSNASQTAWATLGLMAVGEAKSEAVARGIAWLIANQAGDGLWGQEHYTGGGFPRVFYLRYHGYPRYFPLWALARYRNMAQANVEQAQWGM*