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scnpilot_p_inoc_scaffold_4_529

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(593073..593747)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B46E6C similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 214.0
  • Bit_score: 269
  • Evalue 2.50e-69
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:EJU12171.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomona similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 213.0
  • Bit_score: 265
  • Evalue 5.10e-68
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 221.0
  • Bit_score: 262
  • Evalue 1.50e-67

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Taxonomy

Sphingomonas sp. LH128 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGTACCATCAGAGAGATATGCTGATTAGTATGGCAACGCCCGACAGCATCCTGATCGTTGATGACCACGCGCTGGTGCGCGATGGCATGCGGACCCTCCTTGAAGGATGCTTTGCCCAGTGCAGCATTCTGGAGGCGGCCAATTATGCCGAGGCGCGTGAGGCGCTGGCGGGCCATGCCGATGTCGATCTGGTGCTGCTCGATCTCAATATTCCCGATGCCAAGCGCTTTTCCGCCCTGCAAGGGCTGCGCGAGGAACATCCCGCCGTGCCGGTGGTGATGGTGTCGGGCACGCTGGATGGTTCGGCGGTTCGTGAGGCATTAAGCGCGGGCGCGGCCGGGTTCATCCCCAAGAGCCTGAAGCGCGACCAGATCGTCGAGGCGCTGCGCCAGGTGCTGGCGGGCGAGATCTATGTCCCCGATTTCGACTTTGCCGAGGAAGCCAGCACCGGCGAGGAAATCGCCATCCGCCAGCGTATCGCCACGCTGACGCCGCAGCAGAAGGTTGTGCTGGGCCTGCTCGTCTCGGGCCGGCTGAACAAGCAGATCGCCTATGAACTGGACGTTTCGATGACGACGGTGAAGGCGCATGTCTCGGCCATCCTGCAAAAGCTGAATGTGTTCAGCCGCACGCAGGCGGTAATTCTGGCCAATCGGGTCAATTTTCCGGGCTGA
PROTEIN sequence
Length: 225
MYHQRDMLISMATPDSILIVDDHALVRDGMRTLLEGCFAQCSILEAANYAEAREALAGHADVDLVLLDLNIPDAKRFSALQGLREEHPAVPVVMVSGTLDGSAVREALSAGAAGFIPKSLKRDQIVEALRQVLAGEIYVPDFDFAEEASTGEEIAIRQRIATLTPQQKVVLGLLVSGRLNKQIAYELDVSMTTVKAHVSAILQKLNVFSRTQAVILANRVNFPG*