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scnpilot_p_inoc_scaffold_4_560

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(630696..631916)

Top 3 Functional Annotations

Value Algorithm Source
Membrane fusion protein MdtA n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WEN1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 410.0
  • Bit_score: 526
  • Evalue 2.70e-146
  • rbh
Membrane fusion protein MdtA {ECO:0000313|EMBL:EIZ78658.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 410.0
  • Bit_score: 526
  • Evalue 3.80e-146
efflux transporter, RND family, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 430.0
  • Bit_score: 346
  • Evalue 1.10e-92

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Taxonomy

Novosphingobium sp. Rr 2-17 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGTCCGACACCGCGCCCTATTATGAAGATGACCGGCCCCGCCGCAAACCCTGGCTGGCCTATGCGCTGGTGGTGTTGGGGCTGGTGGCGGTGGCGCTGATCGGCAAATGGTTTGCGGGGGCCGGGGCCCAGAAGAACGCGCGTTCGGGGCGTCCGGCGGCGGCGGTTTCGGCGGTGCCGGTGGGCCTTGGCGATATGCCGGTCGAGGTCAACGCTATCGGCACGGTCACGCCCATCGATTCGGCCGCCGTGCGCAGCCAGCTTTCGGGCACGGTTTTCGCCATCCTGTTCAAGGAGGGCCAGCAGGTCCGCGAGGGGCAGGTCATCGCCCAGATCGACCCGCGCCCCTATCGCCTTTCCCTGTCGCAGGCCGAAGGAACATTGGCCAAGGATATGGCCCAGTTGAACTCGGCCAAGCTGGACCTCAAGCGCTATGAAACGCTGGCCTCGCAGGATTCGGTCGCGCGCCAGACGCTCGATACCCAGCGCGCCACGGTGGGCCAGTTGGAGGGCACCGTGGCCGCCGACCGCGCCTCGGTGGGCACGGCGCGGCTCAATCTGCAATATACGGCGGTCAAGGCGCCTTTCTCGGGCCGCATCGGCCTGCGTCAGGTCAGCGTGGGCGCCTATGTCACGCCGTCGGACACGGCAGGCATTGCCACGATCACGCGCACCGATCCCATTGATGTGGCCTTTACCGTGCCGCAGGGGCAATTGAACGCGATTGCCGCCAAGGGGACCGGTCTGCCCGTGATCGCCTATGATCAGGATGGCAAGAGCGAGCTGGCCAAGGGCACGTTCTCGACCTTTGACAATCAGATCGACACCACCACCGGCACGATCAAGGCCAAGGCGCGCTTTGCCAATCCGGCGGCGGTGAAAGCTTTGTTCCCCAATCAGTTCGTCAATGTAAAGATGCTGGTCGATACGCTGCACCAGGTGCCGGTGGTGCCGGTTTCGGCGCTGCGGCACGGCGCACCGGGCGATTTCGTGTTCGTCGTGCAGCCGGACAACAAGGTGAAGCTGACGGTGGTCAAGGTCGGCCCCAGCGATGGGCGGAACACCGCGATCCTTGGCGGACTGAACAAGGGGCAACTGGTCGTGGCCGAGGGCGCGGATGGGCTCGATGACGGCTCGAGCGTGCGCCTGGCGGGCGGCAAGGGCGGCCCGGGAGGACCCGGCGGCGCAGAACACAAGGGCAAGCGCAAGGCGGCCCAATGA
PROTEIN sequence
Length: 407
MSDTAPYYEDDRPRRKPWLAYALVVLGLVAVALIGKWFAGAGAQKNARSGRPAAAVSAVPVGLGDMPVEVNAIGTVTPIDSAAVRSQLSGTVFAILFKEGQQVREGQVIAQIDPRPYRLSLSQAEGTLAKDMAQLNSAKLDLKRYETLASQDSVARQTLDTQRATVGQLEGTVAADRASVGTARLNLQYTAVKAPFSGRIGLRQVSVGAYVTPSDTAGIATITRTDPIDVAFTVPQGQLNAIAAKGTGLPVIAYDQDGKSELAKGTFSTFDNQIDTTTGTIKAKARFANPAAVKALFPNQFVNVKMLVDTLHQVPVVPVSALRHGAPGDFVFVVQPDNKVKLTVVKVGPSDGRNTAILGGLNKGQLVVAEGADGLDDGSSVRLAGGKGGPGGPGGAEHKGKRKAAQ*