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scnpilot_p_inoc_scaffold_4_572

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(644522..645700)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane efflux protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z3H8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 390.0
  • Bit_score: 389
  • Evalue 2.90e-105
  • rbh
Outer membrane efflux protein {ECO:0000313|EMBL:EGD60792.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 390.0
  • Bit_score: 389
  • Evalue 4.10e-105
Outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 387.0
  • Bit_score: 350
  • Evalue 5.50e-94

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGGCACAGGAAAACTATTCTCTCGATCATCTTGAGCAATTAGCGCAGGATACCAATCCTGCTCTTCAGGCTGCCCAGCGCGATGTCGCCATCGCCCGCAGCGAGGTGAGCACCGCGCGCGCCCTGCCCAACCCCACGGTCGAATTCATGACCGGCCCGATGCGCTATAAGCCCGTGGCCAGCGGGCTTTCCGGCACGGCCACCAGCTACAGTCTGTCGCAGCCGCTCGACCTGCCCTTTTCACGCACGCCGCGCATTGAGGCTGCCCGCGCCGGTTTGGCCGCCAGCGAGGCGGGCTTTGCCGGACAGGTGACCAACTGGCTGGCCAATCTGCGCATGGCCTATTACGACCTGCTGCGCCGCAGCGCCGAACAGGTCGTGGCCGAGGAAGATGTCGGCATCGTGCGCTCGATGCAGCAAAAAGTGTCCTTCAGCGTCAAGCAGGGCGAAACGGCCAAATTCGAAGCGATCCGCGCCGAGGCCGAATTGCTCAACGTGCAAAAGACCGCCGCCGCCGCCGCGCTGCGGGTGCAGCAGGCGCGCAGCCAGTTGCGGATGCTGGTGGGGCCCGCCCTGCCGGAGAATTTCACCGTGACGGGGCGTTTGCAGGCTTTGCCCAAATTGCCGCCCTTTGACGAGCTGGTCGAACAGGTCGCGCGCACCAACCCCGATCTGGTTCAGGCCCGCGCCCAGCAGGATCAGGCGCGCTATCGCCTGCGTACCGAGGAAGCGCTGCGCCTGCCGCAGATCGCGCTGCGCGCCGAACGCAGCGGCGACGCCGAACAGGACCAGACCCGCTTTGGCGTCAGCCTGACCGTACCCATCTGGGACCGGCGCAAGGGGCCGGTGGCGGCCGCCGAGGCGCAATTGTCGAAATCCACGCTGGGGCTTGAGGCGCGCGAATATGCGGTGCGTCAGGAACTGGTGATCGCCTACAAGCAATATGAAATCGCCCAGAACACCGTGGCCGCACTCGAAGGCGGCGTGGTGTCGCAGGCGCAATCGGCGCTCAAGGTGGCCGAGTCGGCCTATCGCTTTGGCGAGCGCGGGCTCATCGACGTTCTGGACGCCCAGCGCGTGTTCCGTGCAGCGCGCGCCGACCTTATCAACAGCCGTTTCGATCTGGCCGTGGCGCTGGTCGAGATCCAGCGCCTCAGCTCCAACCTTGCGCAGAGATAA
PROTEIN sequence
Length: 393
MAQENYSLDHLEQLAQDTNPALQAAQRDVAIARSEVSTARALPNPTVEFMTGPMRYKPVASGLSGTATSYSLSQPLDLPFSRTPRIEAARAGLAASEAGFAGQVTNWLANLRMAYYDLLRRSAEQVVAEEDVGIVRSMQQKVSFSVKQGETAKFEAIRAEAELLNVQKTAAAAALRVQQARSQLRMLVGPALPENFTVTGRLQALPKLPPFDELVEQVARTNPDLVQARAQQDQARYRLRTEEALRLPQIALRAERSGDAEQDQTRFGVSLTVPIWDRRKGPVAAAEAQLSKSTLGLEAREYAVRQELVIAYKQYEIAQNTVAALEGGVVSQAQSALKVAESAYRFGERGLIDVLDAQRVFRAARADLINSRFDLAVALVEIQRLSSNLAQR*