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scnpilot_p_inoc_scaffold_4_593

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(671028..671477)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z6M1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 147.0
  • Bit_score: 260
  • Evalue 1.00e-66
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EGD59681.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 147.0
  • Bit_score: 260
  • Evalue 1.40e-66
RNA polymerase sigma70 similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 149.0
  • Bit_score: 217
  • Evalue 2.80e-54

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGCGGCGGTTTGCCCGCGGTCTGACGCGGGACGGGGCCGATGGCGACGATCTGTGCCAGATGACAATCGAACGCGCGCTCAAATCCTCGCATCTGTGGACCGAGGGCACGCGCCTTGATTCATGGGTGTATCGGATCATGCGCAACATATGGATCGACGAGGCCCGCGCCCGCAACCGCGCCAGCCAGACCTTCGCCCCCGAAGAGGATGGCGAACATGTGGGCATGGCGGGCGATGTGGGGATCGAGGCCCATGTCGAACTGGGCAATGTGGACCGCGCGATGGCGCAATTGCCCGATGAGCAGCGCGAGGCGGTGATGCTCGTGCTGGTCGAGGGCTTTGCCTATAAGGAGGCGGCCGAAATCATCGGATGCCCGATAGGCACGCTCACCTCGCGTCTGGCGCGGGGGCGCGAGGCGCTGATGCGCGCATTGGGAGAACAATCATGA
PROTEIN sequence
Length: 150
MRRFARGLTRDGADGDDLCQMTIERALKSSHLWTEGTRLDSWVYRIMRNIWIDEARARNRASQTFAPEEDGEHVGMAGDVGIEAHVELGNVDRAMAQLPDEQREAVMLVLVEGFAYKEAAEIIGCPIGTLTSRLARGREALMRALGEQS*