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scnpilot_p_inoc_scaffold_4_619

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(698826..699377)

Top 3 Functional Annotations

Value Algorithm Source
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 185.0
  • Bit_score: 259
  • Evalue 3.90e-66
chemotaxis protein CheD (EC:3.5.1.44) similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 178.0
  • Bit_score: 244
  • Evalue 2.60e-62
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IMN4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 178.0
  • Bit_score: 244
  • Evalue 9.30e-62

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGCCTTTTGAATCCTCCCCCGCCTCACCCGTCACGCGGATCAACATCCTTCAGGGGCAGGCGCGTGTCTCGGCGGGCCCGCGCGTGGAATTTTCCACCGTGCTGGGCAGTTGCGTGGCCACATGCCTGTTCGATCCCGACATCGAGGTGGGCGGAATGAACCACTTCCTGCTGGCCGAACCGCCGCCCAACACCCACAGCGGCGATTTCGACGAGCATTACGGCGTCTATCTGATGGAGCTGCTGATCAACGAGATGCTGGCCCATGGTGCGGCCAAATCGCGGATGCGCGCCCATCTTTACGGCGGCGCCAATCTGAACAGCGGCTTTGCCCGGATCGGCACCAAGAACGCCGAATTCGCCCGCACCTTTCTGGCCAGCGAGCGCATCACCGTGGTGCGCGAAGATCTGGGCGGGATGAATGCACGCCGCGTCGATTTCCGCCCGGCGCGCGGCCAGGTGCGCTGTCGGACGGTGGAAAACACGCTGGCCCCCGAACCCAAACCCATCATGCGCCCCGCCGTGTCGCGCGGCGATGTCGAACTGTTTTAA
PROTEIN sequence
Length: 184
MPFESSPASPVTRINILQGQARVSAGPRVEFSTVLGSCVATCLFDPDIEVGGMNHFLLAEPPPNTHSGDFDEHYGVYLMELLINEMLAHGAAKSRMRAHLYGGANLNSGFARIGTKNAEFARTFLASERITVVREDLGGMNARRVDFRPARGQVRCRTVENTLAPEPKPIMRPAVSRGDVELF*