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scnpilot_p_inoc_scaffold_4_661

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 739971..740648

Top 3 Functional Annotations

Value Algorithm Source
Flagellar motor component n=1 Tax=Novosphingobium sp. AP12 RepID=J3A1M2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 204.0
  • Bit_score: 171
  • Evalue 1.20e-39
Flagellar motor rotation protein motA {ECO:0000313|EMBL:GAO55280.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 228.0
  • Bit_score: 189
  • Evalue 4.70e-45
chemotaxis protein MotA similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 225.0
  • Bit_score: 161
  • Evalue 3.60e-37

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGGATCTTACCGCCCTCTATGATGGCACCACGCTGGCAATCGTTGTGGGCGGCACGGCGCTGGCCACGGTGCTGCGCTGCGGGCGCTCGGACGTGACGGCCACGATCCGCGTCGCCGCGCGCCAGATGTTGGCGCCCAGCCGCTTTGACGGCGAGGCGGTGCGCGCCTCTCTCGCCCGTGCGGCGCAGGATTTTCAGCGCAACGGCCCGCTGCGCGCCAATCCGCGCAGCACCGGCGATGGCGAATTCGACGATGCGCTTCATGCGCTGTTGGCGCATCGCTCGATGGCGCGCTTTGACGATGCGCTGGCCGATGCGCGCGAAAAGCGGTTGGGTCCGGTCGAGGCGGCCATCCGTACACTGATGCAGGCCACCGAACTGGCTCCGGTTTTCGGGCTGGCCGGAACGCTGATTTCCTTGTCGCAAATGCCCGCGCAGGGGGTGGATCGCGGGGCCTATCTGGCCGCCATCGGCATGGCGGTCCATGCCACGCTTTACGGGCTGGTGCTGGCCAATCTGCTCCTGGCCCCGCTGGCGCGCGTGGTCGAACGCCACGCCCGCGCCGAGGAAGCGGCTCGCCATGCTCTGGCCCAGTGGTTCGAGGCCGAGATCGCCCCGGCCATGGTGCCGCAGCATGAGGCACGCGGCCATCACCACCAGCCCGGCGTGGCGGCATGA
PROTEIN sequence
Length: 226
MDLTALYDGTTLAIVVGGTALATVLRCGRSDVTATIRVAARQMLAPSRFDGEAVRASLARAAQDFQRNGPLRANPRSTGDGEFDDALHALLAHRSMARFDDALADAREKRLGPVEAAIRTLMQATELAPVFGLAGTLISLSQMPAQGVDRGAYLAAIGMAVHATLYGLVLANLLLAPLARVVERHARAEEAARHALAQWFEAEIAPAMVPQHEARGHHHQPGVAA*