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scnpilot_p_inoc_scaffold_59_12

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 9024..9668

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TraF n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z5D2_SPHJU similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 191.0
  • Bit_score: 199
  • Evalue 3.10e-48
Uncharacterized protein {ECO:0000313|EMBL:AHE55585.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 188.0
  • Bit_score: 219
  • Evalue 5.20e-54
traF; conjugal transfer protein TraF similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 191.0
  • Bit_score: 199
  • Evalue 8.60e-49

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Taxonomy

Sphingomonas sanxanigenens → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
TTGGCCAAAAGCGCGGTGAAGGCGATGACTGAGCGCCAGGAAAAAGCGGGGCTTGCAGTCTCGCCGCGCAAGCCCGCCATGCAGCTTTCCATCTGGATGGAGGGCAGTCGGCAACGCGCTGCCCGTCGTCGCCGGTTGCGACGCCGGGCCTGCCTGATGATAGCGGGACTGGTCGCTGGATTGATAGGGCTCGGGGGCACGATCCTGCTGCCTCCCGCCCCGCGTCTGCTCTGGAATGCCAGCGCCAGCGCCCCGGTCGGGCTCTACCTTGTCGAGCCCGTAAGCCTGCCTGCGCGCGGCGATCTGGTGATTGCCTGGCCGCCCGAAGCTGTCCGGCGCCTTGCTGCCGGGCGGAACTATCTGCCCGCCAATGTGCCGCTGGTGAAGCGTGTGGCAGCGGTGCAAGGCGACCTTGTCTGCGCGCGCGGGGCAAGGATTGTGATCAATGGTGCAACGGTTGCAACGAGGCGCGCGGTCGATGGATCGGGCCGCGCATTGCCGCACTGGCAGGGCTGCTTTCGTCTCGGGCAAGGCACCTATTTCCTGCTGATGAGTGAGCATGCCGACTCATTCGACGGGCGCTATTTCGGGCCGGTCGGCGCGGGCAATATTGTCGGTAGGGCGCGCTTGCTATGGGCGCGCTGA
PROTEIN sequence
Length: 215
LAKSAVKAMTERQEKAGLAVSPRKPAMQLSIWMEGSRQRAARRRRLRRRACLMIAGLVAGLIGLGGTILLPPAPRLLWNASASAPVGLYLVEPVSLPARGDLVIAWPPEAVRRLAAGRNYLPANVPLVKRVAAVQGDLVCARGARIVINGATVATRRAVDGSGRALPHWQGCFRLGQGTYFLLMSEHADSFDGRYFGPVGAGNIVGRARLLWAR*