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scnpilot_p_inoc_scaffold_59_25

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 23931..24203

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D00E3E related cluster n=1 Tax=unknown RepID=UPI0003D00E3E similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 90.0
  • Bit_score: 146
  • Evalue 1.70e-32
Conjugal transfer protein TrbD {ECO:0000313|EMBL:KEZ21108.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 85.0
  • Bit_score: 145
  • Evalue 3.10e-32
conjugal transfer protein TrbD similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 87.0
  • Bit_score: 141
  • Evalue 1.50e-31

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Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
GTGAGCGATGCCGACACCCATCCCGAAGGGTTCGAGGCGCCGATCCATCGGTCGCTGACGCAGCCTATATTGCTGGGCGGGGCTCCGCGCGGGCTGGCCATCGTCAATGGGACGCTGGCTGCCGCGCTGGGCCTCGGCCTCCAGCAATGGATCGCGGGACTGGTCGCATGGGCTCTGGGCCACACGCTCGCGGTCTTTGCCGCGCGGCACGATCCCGATTTTGCCGCCGTGCTGATGCGCCACCTTCGCCAGCGAGGATATTTCTCATGCTGA
PROTEIN sequence
Length: 91
VSDADTHPEGFEAPIHRSLTQPILLGGAPRGLAIVNGTLAAALGLGLQQWIAGLVAWALGHTLAVFAARHDPDFAAVLMRHLRQRGYFSC*