ggKbase home page

scnpilot_p_inoc_scaffold_59_29

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 28966..29781

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbF n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJA4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 270.0
  • Bit_score: 369
  • Evalue 2.80e-99
  • rbh
Conjugal transfer protein TrbF {ECO:0000313|EMBL:KHK91877.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 268.0
  • Bit_score: 370
  • Evalue 1.80e-99
conjugal transfer protein TrbF similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 270.0
  • Bit_score: 369
  • Evalue 8.00e-100

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGATGCCGTTCAAACGCGCGGTCCAGCGTTACGGACAGACACCGCAAGCCGAAACTCCCTATCACAAGGCCGGCCAGCTCTGGGATGAGCGGATCGGCAATGCCCGCGTGCAGGCGGCCAACTGGCGCCTTATGGCCTTTGGCACGCTGACTTTGGCCGGCGGCCTTGCCATAGCACTGGTCTGGCAATCGCTGCAAAGCCGGGTCGTGCCCTATGTGGTCGAGGTCGATCGCCTGGGCGAGGCGCGCGCGGTTACGCTGGCGCAGAGCGCCTATCAGCCCAGTGATCCGCAGATCGCATGGTTCCTTGCCCGCTTCATCAAGGATGTCCGTTCGCGCTCGCTCGATCCGGTGCTGATGCGGGGCGACTGGCTTCAGGCCTATGATTTTGTCTCGCCGCGCGGCGCGCTGTTCCTTGGCGACTATGCCCGCGCCGATGATCCCTTCGCCAGGGCGGGCGAGAAGACCGTATCGGTCGAGGTGACCAGCGTGGTTAGGGCCTCGGATCGCTCGTTTCAGGTCAAATGGACCGAAACCACCTATGAGCGCGGCAGCCTTGTGGGCAGCACGCGCTGGACCGCGATGGTTTCAGTGGCGCTCAAACCCCCCAAGCAGGCCGACATTCTGCGCAAGAACCCGCTCGGCCTCTATGTCGATGCCATCGACTGGAGCCGCGAACTCGACAGCGCGGCGGATCGTCCGGCCCCCGGCAATCCTGCCGCGCCTGCTGCCAATCCTCGCTTCCCGGCCCCGACCGCGCAGCCCGATGCGACCACCCCGGCCACCACGCCCTCTCAAACGGAGAACCGTCCATGA
PROTEIN sequence
Length: 272
MMPFKRAVQRYGQTPQAETPYHKAGQLWDERIGNARVQAANWRLMAFGTLTLAGGLAIALVWQSLQSRVVPYVVEVDRLGEARAVTLAQSAYQPSDPQIAWFLARFIKDVRSRSLDPVLMRGDWLQAYDFVSPRGALFLGDYARADDPFARAGEKTVSVEVTSVVRASDRSFQVKWTETTYERGSLVGSTRWTAMVSVALKPPKQADILRKNPLGLYVDAIDWSRELDSAADRPAPGNPAAPAANPRFPAPTAQPDATTPATTPSQTENRP*