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scnpilot_p_inoc_scaffold_80_111

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 134699..135193

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C8B7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 158.0
  • Bit_score: 279
  • Evalue 1.80e-72
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1348853 species="Bacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 158.0
  • Bit_score: 283
  • Evalue 2.30e-73
transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 158.0
  • Bit_score: 279
  • Evalue 8.60e-73

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGAAGGAAGTTTCACGGATGGCAAGTATCGAAAAGCTGCCGATGCTGGCGATTGGCTATGAAAAGCTGACGGCCGAGCTGAAGGCGCTGCGGGAAGAGCGCCCCCGGATCGTTGATGCGATCGAGGAAGCGCGCGCGCATGGCGACCTTTCCGAAAATGCGGAATATCACGCCGCCAAGGAGCGTCAGGGGCAGGTTGAGGCCACGATCGCCGATCTTGAGGACAAGATCAGCCGGGCCCAGATCATCGACCCCACCTCGCTTTCGGGCGACCGGATCATTTTTGGCGCCACCGTCACTTTGCTGGACGATGACGACAAGCCGGTGCGCTATCAGATCGTGGGTCCCTATGAGGCGGACGCGAAACTGGGCCGGATCAGCTATGTCTCGCCGCTGGGCCGGGCGCTGATCGGCAAAAAGGTTGAGGATGAGATCGAGGTGCGCGTGCCTGCGGGCGAGCGCTTCTATGTCGTGGAAAAGATCGAATTCATCTGA
PROTEIN sequence
Length: 165
MKEVSRMASIEKLPMLAIGYEKLTAELKALREERPRIVDAIEEARAHGDLSENAEYHAAKERQGQVEATIADLEDKISRAQIIDPTSLSGDRIIFGATVTLLDDDDKPVRYQIVGPYEADAKLGRISYVSPLGRALIGKKVEDEIEVRVPAGERFYVVEKIEFI*