ggKbase home page

scnpilot_p_inoc_scaffold_80_497

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(500572..502089)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G777_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 521.0
  • Bit_score: 869
  • Evalue 1.60e-249
  • rbh
Type II/IV secretion system ATP hydrolase tadA/virB11/cpaF, tadA subfamily {ECO:0000313|EMBL:GAO56023.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphing similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 511.0
  • Bit_score: 871
  • Evalue 7.80e-250
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 521.0
  • Bit_score: 869
  • Evalue 4.60e-250

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ATGAGCGCATTCGGGCGACGCACTGGCCCCGGCAGCTTTGGCGCAGGCGCAAGGCCACAGTTTGGCGTAGCGCGCCCGATGCGAGCCGATGGTCTGCCCGCCGGTGCTCCTCCTCCGCCGCCTTCGGGCGGGGATCAGTTTCCGCCTTTGCCCACCGAAGCCGAAATGACGATGGATTCCAAGGGCGGCGATGCGATGGCGCGCCTGGCTGAGCGGATGAATTCCACCGTCGAATCCACCCGGCAGGCTGAGGGTTTTGAGGCCAGCGTTCATAAGATCAAAGAGCAGGTGCTGCCCCGCCTGCTCGAGCGCGTTGACCCCGAGGCCGCGGCCACGCTGACCAAGGATGAGCTGGCCGAGGAATTCCGCCCGATCATCATGGAGGTGCTGGCCGAGCTGAAGATCACGCTGAACCGGCGCGAGCAATTCGCGCTGGAAAAGGTGCTGATCGACGAATTGCTCGGCTTTGGCCCGCTGGAGGAATTGCTCAACGATCCGGACGTGTCCGACATCATGGTCAACGGCCCGGACCAGACCTATATTGAAAAGAAGGGCAAACTTCAGCTTTCCACGATCCGTTTCCGCGACGAACAGCATCTGTTCCAGATCGCCCAGCGCATCGTCAATCAGGTCGGCCGCCGCGTTGACCAGACCACGCCGCTGGCCGACGCCCGATTGAAGGACGGCAGCCGTGTGAACGTGATCGTGCCGCCGCTGTCGCTGCGCGGCACGGCGATCTCGATTCGTAAGTTTTCCGAAAAGCCGATCACCATCGACATGCTGCGCGATTTCGGTTCGATGAATGACCGCATGGCCACCGCGCTGAAAATCGCGGGTGCGTGCCGGATGAACATCGTCATTTCGGGCGGCACGGGTTCGGGCAAAACCACCATGCTCAACGCCCTGTCGAAGATGATTGATCCGGGTGAGCGCGTGCTGACCATCGAGGACGCGGCCGAATTGCGCCTGCAACAGCCGCACTGGCTGCCGCTGGAAACGCGCCCGCCCAACCTTGAGGGCCAAGGCGCGATCACCATCGGCGATCTTGTGAAGAACGCTCTGCGTATGCGGCCTGACCGGATCATTCTGGGCGAAATTCGCGGCGCGGAATGTTTCGACCTGCTGGCCGCGATGAACACCGGCCATGACGGATCGATGTGCACACTCCACGCCAATTCCCCGCGCGAATGCCTTGGCCGTATGGAAAACATGATCCTGATGGGCGACATCAAGATCCCCAAGGAAGCCATCAGCCGCCAGATCGCCGAATCGGTTGATCTGATCGTTCAGGTCAAACGCCTGCGCGATGGCAGCCGCCGCACCACCAATATCACCGAGGTGATCGGGATGGAGGGCGATGTGATCGTCACGCAGGAATTGTTCAAGTTCGAATATCTGGACGAAACCGACGACGGCAAGATCATCGGTGAATGGCGTTCCTCGGGCCTGCGCCCCTACACTTTGGAAAAGGCGCGCCAGTTCGGCTTCGACCAGACCTTCCTTGAGGCATGTCTCTGA
PROTEIN sequence
Length: 506
MSAFGRRTGPGSFGAGARPQFGVARPMRADGLPAGAPPPPPSGGDQFPPLPTEAEMTMDSKGGDAMARLAERMNSTVESTRQAEGFEASVHKIKEQVLPRLLERVDPEAAATLTKDELAEEFRPIIMEVLAELKITLNRREQFALEKVLIDELLGFGPLEELLNDPDVSDIMVNGPDQTYIEKKGKLQLSTIRFRDEQHLFQIAQRIVNQVGRRVDQTTPLADARLKDGSRVNVIVPPLSLRGTAISIRKFSEKPITIDMLRDFGSMNDRMATALKIAGACRMNIVISGGTGSGKTTMLNALSKMIDPGERVLTIEDAAELRLQQPHWLPLETRPPNLEGQGAITIGDLVKNALRMRPDRIILGEIRGAECFDLLAAMNTGHDGSMCTLHANSPRECLGRMENMILMGDIKIPKEAISRQIAESVDLIVQVKRLRDGSRRTTNITEVIGMEGDVIVTQELFKFEYLDETDDGKIIGEWRSSGLRPYTLEKARQFGFDQTFLEACL*