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scnpilot_p_inoc_scaffold_80_513

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 517089..517739

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Novosphingobium sp. AP12 RepID=J2H155_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 216.0
  • Bit_score: 262
  • Evalue 5.10e-67
Putative transcriptional regulator {ECO:0000313|EMBL:EJL29008.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 216.0
  • Bit_score: 262
  • Evalue 7.10e-67
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 216.0
  • Bit_score: 239
  • Evalue 9.90e-61

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Taxonomy

Novosphingobium sp. AP12 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGGAACAGGAAAATGCCCGAACCACTTTGATGGCTCTATCCACCGAGCGCGGGGTCAGTCTGGCGGCTCTGTCGTCACTAATTGGACGTAATCCCAGCTATTTACAGCAGTTTGTTAAGAAAAGAAGTCCGCGCAGGCTGGAGGAGAGGGACCGGCGAAAACTGGCGCAGTTCTTTGGTGTGGACGAATCACGGCTGGGCGGGATGGAGGAAAAATCTGTCGCCCCCATAGGAAAACCTGTGCGAGCGCATTGGGTTGATGTTCCGCGCCTTGCGCTTGATGCATCGGCCGGGCCGGGGGCGACGGCCGGGGGCGAGCAGCCCTTTGGCGCGCTGCGCTTTTCGCATGACTGGCTGCGAAGCATGGGATTGAATTCGGCCGATCTGACGACGATCGCGGTGGCCGGGGATTCGATGCATCCCGTGCTCAATGACGGCGATGAAATTCTGGTCGACCGCTCACGCCGCGCCCTGCGCGATGGCATCCATGTGGTGCGCGTGGGAGACCATGTGCTGGTCAAGCGAATCGATATGGGGCATCCGGGGCGGGTGCGGCTGAAAAGCGACAATCCGGCCTATGATCCGATTGATCTGGCGCCCGAGGACGTGACCGTGATCGGCCGTGTGGTGTGGAAGGGGGGGCGGCTCTAA
PROTEIN sequence
Length: 217
MEQENARTTLMALSTERGVSLAALSSLIGRNPSYLQQFVKKRSPRRLEERDRRKLAQFFGVDESRLGGMEEKSVAPIGKPVRAHWVDVPRLALDASAGPGATAGGEQPFGALRFSHDWLRSMGLNSADLTTIAVAGDSMHPVLNDGDEILVDRSRRALRDGIHVVRVGDHVLVKRIDMGHPGRVRLKSDNPAYDPIDLAPEDVTVIGRVVWKGGRL*