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scnpilot_p_inoc_scaffold_80_519

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 522029..522322

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6B942 similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 97.0
  • Bit_score: 160
  • Evalue 1.20e-36
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1630648 species="Bacteria; Proteobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 96.0
  • Bit_score: 160
  • Evalue 1.70e-36
ihfA; integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 97.0
  • Bit_score: 156
  • Evalue 3.80e-36

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 294
GTGCGATCTATGTCTACACTGACAAGAGCTGATCTGGCCGAAGCCATCAACCGCAAACTGGGCCTGTCGCGGGCCGATTCCCTCAATATGGTGGAATCGATCCTCGATCTCGTCTCAGACTCTCTGGCCGAAGGCGAGAACGTCAAGATCTCAGGCTTTGGCACTTTCCTGCTGCGCGACAAGAGCGAGCGCGTGGGCCGCAATCCCAAGACCGGCGTCGAAGTGCCGATCACGCCGCGCCGCGTGCTGACCTTCCGCGCCAGCCAGATGCTGAAAGATCGCGTCGCGAATTAA
PROTEIN sequence
Length: 98
VRSMSTLTRADLAEAINRKLGLSRADSLNMVESILDLVSDSLAEGENVKISGFGTFLLRDKSERVGRNPKTGVEVPITPRRVLTFRASQMLKDRVAN*