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scnpilot_p_inoc_scaffold_80_530

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 534510..535988

Top 3 Functional Annotations

Value Algorithm Source
Methyl-accepting chemotaxis protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E8C6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 468.0
  • Bit_score: 364
  • Evalue 2.20e-97
Methyl-accepting chemotaxis protein I {ECO:0000313|EMBL:GAO53027.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 459.0
  • Bit_score: 379
  • Evalue 5.30e-102
chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 468.0
  • Bit_score: 364
  • Evalue 6.10e-98

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1479
GTGCTTTTCGGGAACAGTTCAACCCCAGGCATCCGACAGAAACTGGTGTTCTGCCTTGGCGCGCTGGCCGCGGTCAGCGTGGTGCAGGTGTCGGCGGCGACCTTTCTGCATTACCGGCTCTATGCCGCCAATCAGGCGCTCAGCGCAGCAGCGGGCACGGCGGGGGGCGTGGACGCGCTGATCATGGCCGCTGTGATCACCACGCTGATCACCATCGTGGTGGGCGCGGGCACCTTGCTGTGGGCGGGGCTGTTCGTCTCGCGCGCGGTGGTGGAGCCGGTGTCGCATCTGGCGCAATGCCTGAACGCCATGGCTTCGGGCAATTACGATGTCGCGCTGGAGGGCGAGGACAATGGCGACGAGGTGGCCCAGATGTATGCGGCCGCCGCCGTGTTCCGCGAAACCGCCGTGGCCAAGCAGGTGGCCGATGAGCAGCAGCACAAGGTGGTGCGCGCGTTGAGCGAGGGCCTGGACCGGCTGGCCGCGCAGGATCTGGAATTTCGCATCGAGACGGCCTTTCCCGCCGATTACGAACAGTTGCGCGTCAATTTCAATCAGGCGCTGATCTCGCTGGCCAAGGCGATCGGGTCGGTGCGGGTGGGCGCGGCCAGCGTGATGGAATCCATTCAGGACATCCGCAGCGCCAGCGACGATATGGCCCAGCGCAACACCCAGCAGGCCGCGACGCTGGAAGAAACCGCCGCCGCGATGAGCCAGGTGACCGACGGGGTGCAGGAAACCGCCACCCGCGCCACCGAGGTGCAGCGCGCGATTGCCGAGACCTGCACGCAGGCCGACGAGGGCGCGGGCGTGGTGACGCGGGCGATCGACGCGATGGCGGCGCTGGAAAGTTCGGCCACGGAAATCGGCAAGATCGTGGGCGTGATCGACGGGATTGCGTTTCAGACCAACCTACTGGCGCTCAACGCCGGTGTTGAGGCCGCGCGCGCGGGCGAGGCGGGCAAGGGCTTTGCCGTGGTCGCCAATGAGGTGCGCGCGCTGGCCCAGCGCAGCGCGGATGCGGCGCGCAACATTGGCGGATTGATCCATGATTCGGCCGATCAGGTTTCGGGGGGCGTCGCTCTTGTGCGCGAGACGGGGGATCTGCTGCGCCACATCATGGGCCGCGTGGGCGAGATCAACGAGGTCATCACCGACATTGCCACCAGCGCAGAATTGCAGGCGCAGAACATCCATCAGGTCAACAATGCCGTCAGCGAACTGGACCGCGTGACCCAGAAGAACGCCGCCATGGTCGAACAGACCACCGCGGCCACCCGCGATCTGGCGCATGAGGCCGAGCAGCTTTCGGCCATGGTGCGCACATTCCGCACCCGCGACAGAGACGCGCGCGCCCAGTCCAAGGAGAAGGCCGCCGCCCGCCGGCTGAGCAGCGTGCCCCAGCGCAATGTCATGTCGATTGCGGGCAATCTGGCGCTGGCCCCCGCGCCATCGGGCGAAGACTGGAGCGAGTTCTAG
PROTEIN sequence
Length: 493
VLFGNSSTPGIRQKLVFCLGALAAVSVVQVSAATFLHYRLYAANQALSAAAGTAGGVDALIMAAVITTLITIVVGAGTLLWAGLFVSRAVVEPVSHLAQCLNAMASGNYDVALEGEDNGDEVAQMYAAAAVFRETAVAKQVADEQQHKVVRALSEGLDRLAAQDLEFRIETAFPADYEQLRVNFNQALISLAKAIGSVRVGAASVMESIQDIRSASDDMAQRNTQQAATLEETAAAMSQVTDGVQETATRATEVQRAIAETCTQADEGAGVVTRAIDAMAALESSATEIGKIVGVIDGIAFQTNLLALNAGVEAARAGEAGKGFAVVANEVRALAQRSADAARNIGGLIHDSADQVSGGVALVRETGDLLRHIMGRVGEINEVITDIATSAELQAQNIHQVNNAVSELDRVTQKNAAMVEQTTAATRDLAHEAEQLSAMVRTFRTRDRDARAQSKEKAAARRLSSVPQRNVMSIAGNLALAPAPSGEDWSEF*