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scnpilot_p_inoc_scaffold_80_533

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 539609..540970

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6N7_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 458.0
  • Bit_score: 740
  • Evalue 1.00e-210
  • rbh
Response regulatory protein {ECO:0000313|EMBL:GAO55945.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 454.0
  • Bit_score: 755
  • Evalue 4.30e-215
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 458.0
  • Bit_score: 740
  • Evalue 2.90e-211

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ATGAGTGAGACGCGGCCCAAACTGCTCGTGATCGAGGATGATCCGGGGCTCCAGGCTCAGCTCAAATGGGCCTATGAGGATTTCGAGGTGATCGTGGCCGGGGATCGCGCCAGCGCCATGGCCGCGCTGCGCAGCGAGGAGCCGGCGGTCGTCACGCTCGACCTTGGCCTGCCGCCCGATCCGGACGGCACCAGCGAGGGCTTTGCCTTGCTGGACGAGATCATGGGCTTGAAGCCCGACACCAAGGTGATCGTGGCCAGCGGGCATGGCGCGCGTGAAAGCGCCTTGCAGGCCATCGAGCGCGGGGCCTATGATTTCTATCAGAAGCCGATGGATTTCGATGAAATGGCGCTGATTGCGGCCCGCGCCTATCGGCTGTACCGGCTGGAGGCGGAGAACCGCGCCTTGGCCGTGCGGGCGGGCAAGGACAATCGCGTGTTGGGCACGATGATCACCGCCGCGCCCGAAATGCTGCGCGTCGCGCGCACGATAGAGCGGGTGGCGGGCACCAATGTTTCGGTCATGCTGCTGGGCGCCAGCGGCACGGGCAAGGAATTGCTGGCGCGCGGATTGCATGAGGCCAGCGGGCGGGCAGGGGCTTTTGTCGCGATCAATTGCGCGGCGATCCCGGAAAACCTGCTGGAATCGGAACTCTTCGGCCATGAAAAGGGCGCGTTTACCGGCGCGGTCAAAACCACCGAGGGCAAGATCGAGCAGGCCCATGGCGGCACGCTGTTCCTTGACGAGGTGGGCGATATTCCCTTCGCGCTGCAGGTCAAATTGCTGCGTTTCCTGCAGGAGCGGGTGATCGAGCGGATCGGCGGGCGGCGTTCGATTGCGGTCGATACGCGCATCGTCTGCGCCACGCATCAAAACCTTGAGGCGATGATCGCCGATGGCCGTTTCCGCGAGGATCTGTGGTATCGGCTGGCCGAAATCGTGGTCAAAATCCCCTCGCTGGCCGAGCGGCCGGGCGATGCGGCGCTGCTGGCGCGGGCGTTTCTGGCGCGTTTTGCCAAGGAGATGAACCCGGCGGTCAAGGGCTTTGCCCCTGATGCTCTGGCCGCGATGGATGCGTGGGGATGGCCGGGCAATGTGCGCGAGTTGGAAAACCGGGTGAAGCGCGCCGTCATCATGGCCGATGGCAAGCTGGTCCATGCGGGCGATCTCGATCTGGACGCGCCGGGGGGCGAGGAGGACCTGCCGCTCAACCTGAAATCTGCGCGGGAGATTACCGACCGGCGGGTGATCCGTCAGGCACTGGCGCGCAGCGAGGGCAATATTTCCTCAACCGCCAAGCTGCTGGGGATCAGCCGCCCGACGCTTTACGATTTGCTCAAGCAATATGACTTGCAGCACTGA
PROTEIN sequence
Length: 454
MSETRPKLLVIEDDPGLQAQLKWAYEDFEVIVAGDRASAMAALRSEEPAVVTLDLGLPPDPDGTSEGFALLDEIMGLKPDTKVIVASGHGARESALQAIERGAYDFYQKPMDFDEMALIAARAYRLYRLEAENRALAVRAGKDNRVLGTMITAAPEMLRVARTIERVAGTNVSVMLLGASGTGKELLARGLHEASGRAGAFVAINCAAIPENLLESELFGHEKGAFTGAVKTTEGKIEQAHGGTLFLDEVGDIPFALQVKLLRFLQERVIERIGGRRSIAVDTRIVCATHQNLEAMIADGRFREDLWYRLAEIVVKIPSLAERPGDAALLARAFLARFAKEMNPAVKGFAPDALAAMDAWGWPGNVRELENRVKRAVIMADGKLVHAGDLDLDAPGGEEDLPLNLKSAREITDRRVIRQALARSEGNISSTAKLLGISRPTLYDLLKQYDLQH*