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scnpilot_p_inoc_scaffold_80_535

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(542259..543131)

Top 3 Functional Annotations

Value Algorithm Source
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 289.0
  • Bit_score: 505
  • Evalue 3.80e-140
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11) similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 289.0
  • Bit_score: 496
  • Evalue 6.00e-138
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Novosphingobium sp. AP12 RepID=J3A1Z0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 289.0
  • Bit_score: 501
  • Evalue 5.10e-139
  • rbh

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Taxonomy

Novosphingobium sp. P6W → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGTCTACGACCTTTCAGATCGATACGGCCACCAGCCGCGCCAACCCCACCCCCACGCCGATGCGCCGGCTGACCATTCCGGCCATCCGACAGCGCAAGAAGGACGGCGTGACCGCAGAGCCTGTGGTGATGCTGACCGCCTATACCGCGCGTCAGGCGCAATTGCTGGATGCGCATTGCGACCTGCTGCTGGTGGGCGATTCGCTGGGTCAGGTGATCTATGGCCTGCCCTCGTCGCTGCCCGTCACGCTGGACATGATGGTGGCCCATGGCGCCGCAGTGGTGCGCGGCAGTTGGCATTCCGCCGTCATCGTCGATCTGCCCTTCGGCACCTATGAAGCCTCGCCCCAGCAGGCATTTGAAACCGCCGCGCGGGTTTTGCGCGAAACGGGATGCGCGGGGGTAAAGCTGGAAGGCGGCGCGGCGATGGCCGAAACCGTGGCCTTTCTCTCTCAGCGCGGCATTCCGGTGATGGGCCATATCGGCCTGACGCCGCAGGCGGTGAACCAGTTGGGCGGCTATGGCGCACGCGGGCGTAGCGAGGCCGAGGCGGAAAAGATTCTGGGCGATGCGCGCGCTCTGGACAAGGCCGGGGCCTTTGGCATCGTCGTGGAAGGCGTGGTCGAACCTTTGGCCGTGGCTATCACCAAGGCGGTGGCCTGCCCCACCATCGGCATCGGCGGCTCGGCGCAATGCGACGGACAGGTACTGGTCACCGAGGACATGCTGGGCATGTTTGAGCGCGTGCCGCGTTTCGTCAAACGCTATGCCGATGTGGCGGGCCTGATCTCTGAGGCGGCCGCCGACTATGCCGCCGAGGTGCGCAGCCGCAGCTTCCCCGGCATCGAACAGACCTATCAGCCCAAAGCCTGA
PROTEIN sequence
Length: 291
MSTTFQIDTATSRANPTPTPMRRLTIPAIRQRKKDGVTAEPVVMLTAYTARQAQLLDAHCDLLLVGDSLGQVIYGLPSSLPVTLDMMVAHGAAVVRGSWHSAVIVDLPFGTYEASPQQAFETAARVLRETGCAGVKLEGGAAMAETVAFLSQRGIPVMGHIGLTPQAVNQLGGYGARGRSEAEAEKILGDARALDKAGAFGIVVEGVVEPLAVAITKAVACPTIGIGGSAQCDGQVLVTEDMLGMFERVPRFVKRYADVAGLISEAAADYAAEVRSRSFPGIEQTYQPKA*